Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 PMS2P1-201ENST00000431037 1228 ntBASIC18.04■□□□□ 0.48
SHC3Q92529 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.04■□□□□ 0.48
SHC3Q92529 AC108073.2-201ENST00000464002 357 ntBASIC18.04■□□□□ 0.48
SHC3Q92529 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.04■□□□□ 0.48
SHC3Q92529 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.04■□□□□ 0.48
SHC3Q92529 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.04■□□□□ 0.48
SHC3Q92529 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.04■□□□□ 0.48
SHC3Q92529 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.04■□□□□ 0.48
SHC3Q92529 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.04■□□□□ 0.48
SHC3Q92529 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.04■□□□□ 0.48
SHC3Q92529 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
SHC3Q92529 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SHC3Q92529 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.04■□□□□ 0.48
SHC3Q92529 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.04■□□□□ 0.48
SHC3Q92529 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.04■□□□□ 0.48
SHC3Q92529 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SHC3Q92529 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SHC3Q92529 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 AC131009.4-201ENST00000624048 1740 ntBASIC18.03■□□□□ 0.48
SHC3Q92529 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.03■□□□□ 0.48
SHC3Q92529 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.03■□□□□ 0.48
SHC3Q92529 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
SHC3Q92529 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.03■□□□□ 0.48
SHC3Q92529 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SHC3Q92529 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.03■□□□□ 0.48
SHC3Q92529 SLC25A6P4-201ENST00000586535 553 ntBASIC18.03■□□□□ 0.48
SHC3Q92529 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SHC3Q92529 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
SHC3Q92529 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.03■□□□□ 0.48
SHC3Q92529 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.03■□□□□ 0.48
SHC3Q92529 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SHC3Q92529 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
SHC3Q92529 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.02■□□□□ 0.48
SHC3Q92529 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHC3Q92529 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.02■□□□□ 0.48
SHC3Q92529 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC3Q92529 AL353732.1-201ENST00000569618 1459 ntBASIC18.02■□□□□ 0.48
SHC3Q92529 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC3Q92529 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHC3Q92529 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC3Q92529 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.02■□□□□ 0.48
SHC3Q92529 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC3Q92529 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SHC3Q92529 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.02■□□□□ 0.48
SHC3Q92529 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.02■□□□□ 0.48
SHC3Q92529 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SHC3Q92529 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC3Q92529 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.02■□□□□ 0.48
SHC3Q92529 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC3Q92529 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.02■□□□□ 0.48
SHC3Q92529 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHC3Q92529 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SHC3Q92529 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.02■□□□□ 0.48
SHC3Q92529 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.02■□□□□ 0.48
SHC3Q92529 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SHC3Q92529 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.02■□□□□ 0.48
SHC3Q92529 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SHC3Q92529 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.02■□□□□ 0.48
SHC3Q92529 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.02■□□□□ 0.48
SHC3Q92529 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.02■□□□□ 0.48
SHC3Q92529 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SHC3Q92529 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SHC3Q92529 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SHC3Q92529 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SHC3Q92529 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SHC3Q92529 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SHC3Q92529 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SHC3Q92529 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.01■□□□□ 0.47
SHC3Q92529 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHC3Q92529 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHC3Q92529 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHC3Q92529 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SHC3Q92529 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.01■□□□□ 0.47
SHC3Q92529 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.01■□□□□ 0.47
SHC3Q92529 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHC3Q92529 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SHC3Q92529 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms