Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 AL138688.1-201ENST00000624851 1594 ntBASIC22.04■■□□□ 1.12
RAPGEF4Q8WZA2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC22.03■■□□□ 1.12
RAPGEF4Q8WZA2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 AC027307.3-201ENST00000594262 1100 ntBASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 AL138828.2-201ENST00000615812 383 ntBASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAPGEF4Q8WZA2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RAPGEF4Q8WZA2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 AC022144.1-201ENST00000602255 1580 ntBASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 GK-202ENST00000378941 458 ntTSL 3 BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 HNRNPA3P5-201ENST00000455201 833 ntBASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 PRYP6-201ENST00000514804 343 ntBASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RAPGEF4Q8WZA2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 AC108860.2-201ENST00000562760 2183 ntBASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 PIN1P1-201ENST00000412108 996 ntBASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC22■■□□□ 1.11
RAPGEF4Q8WZA2 FOXO1B-201ENST00000504678 1527 ntBASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms