Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RN7SL828P-201ENST00000607615 303 ntBASIC20.37■□□□□ 0.85
SNED1Q8TER0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNED1Q8TER0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNED1Q8TER0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNED1Q8TER0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNED1Q8TER0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNED1Q8TER0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNED1Q8TER0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNED1Q8TER0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNED1Q8TER0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNED1Q8TER0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.37■□□□□ 0.85
SNED1Q8TER0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNED1Q8TER0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 MIR1909-201ENST00000411312 80 ntBASIC20.36■□□□□ 0.85
SNED1Q8TER0 DFFBP1-201ENST00000433250 979 ntBASIC20.36■□□□□ 0.85
SNED1Q8TER0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 ACA64.2-201ENST00000459014 129 ntBASIC20.36■□□□□ 0.85
SNED1Q8TER0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 AL512361.1-201ENST00000554200 418 ntBASIC20.36■□□□□ 0.85
SNED1Q8TER0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 AC116353.5-201ENST00000638148 1699 ntBASIC20.36■□□□□ 0.85
SNED1Q8TER0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 AC007541.1-201ENST00000570282 1469 ntBASIC20.36■□□□□ 0.85
SNED1Q8TER0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 AC098614.1-201ENST00000368528 745 ntBASIC20.36■□□□□ 0.85
SNED1Q8TER0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 AL353705.2-201ENST00000428243 662 ntBASIC20.36■□□□□ 0.85
SNED1Q8TER0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.36■□□□□ 0.85
SNED1Q8TER0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNED1Q8TER0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNED1Q8TER0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SNED1Q8TER0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.35■□□□□ 0.85
SNED1Q8TER0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.35■□□□□ 0.85
SNED1Q8TER0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.35■□□□□ 0.85
SNED1Q8TER0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNED1Q8TER0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNED1Q8TER0 AC007613.1-201ENST00000572811 2597 ntBASIC20.35■□□□□ 0.85
SNED1Q8TER0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNED1Q8TER0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.35■□□□□ 0.85
SNED1Q8TER0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNED1Q8TER0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNED1Q8TER0 NOC2LP2-201ENST00000407594 1944 ntBASIC20.35■□□□□ 0.85
SNED1Q8TER0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.35■□□□□ 0.85
SNED1Q8TER0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.35■□□□□ 0.85
SNED1Q8TER0 BTBD7P1-201ENST00000447253 1453 ntBASIC20.35■□□□□ 0.85
SNED1Q8TER0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNED1Q8TER0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNED1Q8TER0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.35■□□□□ 0.85
SNED1Q8TER0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.35■□□□□ 0.85
SNED1Q8TER0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.35■□□□□ 0.85
SNED1Q8TER0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.35■□□□□ 0.85
SNED1Q8TER0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.35■□□□□ 0.85
SNED1Q8TER0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.35■□□□□ 0.85
SNED1Q8TER0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNED1Q8TER0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.35■□□□□ 0.85
SNED1Q8TER0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.35■□□□□ 0.85
SNED1Q8TER0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.34■□□□□ 0.85
SNED1Q8TER0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNED1Q8TER0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms