Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 KRT8P48-201ENST00000515599 1220 ntBASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 AC026120.1-201ENST00000611536 926 ntBASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 MIR770-201ENST00000390219 98 ntBASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 MIR4515-201ENST00000584082 81 ntBASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 UBALD1-205ENST00000590891 2641 ntBASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SHKBP1Q8TBC3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 AL627223.1-201ENST00000416693 442 ntBASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SHKBP1Q8TBC3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SHKBP1Q8TBC3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms