Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 TOP3BP1-201ENST00000420768 1380 ntBASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDH19Q8TAB3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 AC136632.2-201ENST00000512891 861 ntBASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 AP002414.3-201ENST00000589352 1468 ntBASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH19Q8TAB3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 AC006277.1-201ENST00000624348 1610 ntBASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 AC105339.3-201ENST00000560043 636 ntBASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 AC013467.2-201ENST00000605472 835 ntBASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 FAM215A-202ENST00000632077 792 ntBASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 PCDHB19P-201ENST00000570871 2371 ntBASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms