Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 IGHV3-65-201ENST00000523210 341 ntBASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 AC148477.8-201ENST00000624298 468 ntBASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 AC087163.2-201ENST00000457299 853 ntBASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 PCDHA12-202ENST00000613593 2588 ntBASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 AC129492.6-201ENST00000611383 1305 ntBASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.18■□□□□ 0.18
SRFBP1Q8NEF9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 TOP3BP1-201ENST00000420768 1380 ntBASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 AC105020.1-201ENST00000435356 2205 ntBASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms