Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AC067930.6-201ENST00000623257 4947 ntBASIC16.53■□□□□ 0.24
HIPK4Q8NE63 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 AC145285.6-201ENST00000604632 637 ntBASIC16.53■□□□□ 0.24
HIPK4Q8NE63 AC004263.2-201ENST00000617183 678 ntBASIC16.53■□□□□ 0.24
HIPK4Q8NE63 AL031432.5-201ENST00000641059 760 ntBASIC16.53■□□□□ 0.24
HIPK4Q8NE63 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HIPK4Q8NE63 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 AC005104.2-201ENST00000427818 678 ntBASIC16.52■□□□□ 0.24
HIPK4Q8NE63 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 AC112698.1-201ENST00000510299 916 ntBASIC16.52■□□□□ 0.24
HIPK4Q8NE63 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HIPK4Q8NE63 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIPK4Q8NE63 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.52■□□□□ 0.23
HIPK4Q8NE63 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIPK4Q8NE63 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIPK4Q8NE63 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HIPK4Q8NE63 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIPK4Q8NE63 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HIPK4Q8NE63 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
HIPK4Q8NE63 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HIPK4Q8NE63 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.52■□□□□ 0.23
HIPK4Q8NE63 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HIPK4Q8NE63 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
HIPK4Q8NE63 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.51■□□□□ 0.23
HIPK4Q8NE63 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 HLA-F-220ENST00000434407 884 ntBASIC16.51■□□□□ 0.23
HIPK4Q8NE63 SLC25A3P1-201ENST00000443844 931 ntBASIC16.51■□□□□ 0.23
HIPK4Q8NE63 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HIPK4Q8NE63 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms