Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 AC006504.4-201ENST00000592118 1568 ntBASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 FDX1P1-201ENST00000449115 551 ntBASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 AC018712.1-201ENST00000455767 687 ntBASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 AC009078.2-202ENST00000463353 338 ntBASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 AP002469.2-201ENST00000531724 424 ntBASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.02■□□□□ 0.16
SIMC1Q8NDZ2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SIMC1Q8NDZ2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.02■□□□□ 0.15
SIMC1Q8NDZ2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SIMC1Q8NDZ2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
SIMC1Q8NDZ2 PCDHA1-201ENST00000378133 2726 ntBASIC16.02■□□□□ 0.15
SIMC1Q8NDZ2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
SIMC1Q8NDZ2 RNF216P1-203ENST00000404404 2427 ntBASIC16.02■□□□□ 0.15
SIMC1Q8NDZ2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 AL139424.1-201ENST00000607572 797 ntBASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 AL589182.2-201ENST00000619332 1049 ntBASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 AC004706.3-202ENST00000621574 984 ntBASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 AC107918.4-202ENST00000641623 219 ntBASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 UBALD1-205ENST00000590891 2641 ntBASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
SIMC1Q8NDZ2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 GPR89P-201ENST00000407924 1495 ntBASIC16■□□□□ 0.15
SIMC1Q8NDZ2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 ELK2BP-201ENST00000415014 1224 ntBASIC16■□□□□ 0.15
SIMC1Q8NDZ2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 KRT18P67-201ENST00000432816 1264 ntBASIC16■□□□□ 0.15
SIMC1Q8NDZ2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 AC073648.2-201ENST00000510116 352 ntBASIC16■□□□□ 0.15
SIMC1Q8NDZ2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16■□□□□ 0.15
SIMC1Q8NDZ2 AL160237.2-201ENST00000556165 472 ntBASIC16■□□□□ 0.15
SIMC1Q8NDZ2 AC139887.3-201ENST00000568585 713 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms