Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PAF1Q8N7H5 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 HNRNPDP1-201ENST00000439535 754 ntBASIC17.46■□□□□ 0.39
PAF1Q8N7H5 FDX1P1-201ENST00000449115 551 ntBASIC17.46■□□□□ 0.39
PAF1Q8N7H5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 AC120114.3-201ENST00000611923 658 ntBASIC17.46■□□□□ 0.39
PAF1Q8N7H5 AC008735.5-201ENST00000623544 497 ntBASIC17.46■□□□□ 0.39
PAF1Q8N7H5 AC005593.1-201ENST00000624894 515 ntBASIC17.46■□□□□ 0.39
PAF1Q8N7H5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PAF1Q8N7H5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PAF1Q8N7H5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PAF1Q8N7H5 HLA-A-201ENST00000376802 1334 ntBASIC17.46■□□□□ 0.38
PAF1Q8N7H5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PAF1Q8N7H5 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
PAF1Q8N7H5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PAF1Q8N7H5 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
PAF1Q8N7H5 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PAF1Q8N7H5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 AL590627.1-203ENST00000421194 1026 ntBASIC17.45■□□□□ 0.38
PAF1Q8N7H5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PAF1Q8N7H5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms