Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 CRYGEP-201ENST00000412192 528 ntBASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 PMS2P2-201ENST00000425039 1128 ntBASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC33Q8N5R6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 AC092068.3-201ENST00000587894 2016 ntBASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 AC011676.5-201ENST00000624864 2660 ntBASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 DNAJB3-202ENST00000449667 1266 ntBASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 MIR4751-201ENST00000578027 74 ntBASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC33Q8N5R6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 AC211486.1-202ENST00000416371 468 ntBASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 AC211476.1-201ENST00000503899 468 ntBASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 AC018845.2-201ENST00000568326 409 ntBASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 AC027796.2-201ENST00000575326 344 ntBASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 AL596442.2-201ENST00000610240 980 ntBASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC33Q8N5R6 AC005915.1-201ENST00000624912 2018 ntBASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC33Q8N5R6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms