Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 AC084018.2-201ENST00000613093 2607 ntBASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 LAGE3P1-201ENST00000425356 484 ntBASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 AC006557.2-201ENST00000592985 1240 ntBASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 AC107918.4-202ENST00000641623 219 ntBASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TTC9CQ8N5M4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 AC073648.2-201ENST00000510116 352 ntBASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 DUX4L17-201ENST00000557360 1267 ntBASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 AC011676.5-201ENST00000624864 2660 ntBASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC9CQ8N5M4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC9CQ8N5M4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
TTC9CQ8N5M4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TTC9CQ8N5M4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms