Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD3Q8N328 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.2■□□□□ 0.34
PGBD3Q8N328 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.2■□□□□ 0.34
PGBD3Q8N328 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.2■□□□□ 0.34
PGBD3Q8N328 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD3Q8N328 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD3Q8N328 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PGBD3Q8N328 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD3Q8N328 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.2■□□□□ 0.34
PGBD3Q8N328 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.2■□□□□ 0.34
PGBD3Q8N328 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PGBD3Q8N328 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 LINC01451-201ENST00000623792 534 ntBASIC17.19■□□□□ 0.34
PGBD3Q8N328 AL645728.2-201ENST00000641974 660 ntBASIC17.19■□□□□ 0.34
PGBD3Q8N328 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PGBD3Q8N328 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.19■□□□□ 0.34
PGBD3Q8N328 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.19■□□□□ 0.34
PGBD3Q8N328 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 AL355306.1-201ENST00000415580 579 ntBASIC17.18■□□□□ 0.34
PGBD3Q8N328 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 AL592309.1-201ENST00000443127 649 ntBASIC17.18■□□□□ 0.34
PGBD3Q8N328 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 AL096865.1-201ENST00000606796 927 ntBASIC17.18■□□□□ 0.34
PGBD3Q8N328 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PGBD3Q8N328 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PGBD3Q8N328 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PGBD3Q8N328 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PGBD3Q8N328 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PGBD3Q8N328 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PGBD3Q8N328 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms