Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 ELK2BP-201ENST00000415014 1224 ntBASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 AF186996.4-201ENST00000467186 377 ntBASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 DUX4L17-201ENST00000557360 1267 ntBASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 AL031008.1-201ENST00000619963 541 ntBASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC116Q8IYX3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 AL645728.1-201ENST00000366221 2101 ntBASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 PCDHA14-201ENST00000506751 2298 ntBASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 KRT18P67-201ENST00000432816 1264 ntBASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 PAWRP1-201ENST00000451083 565 ntBASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 AC148477.8-201ENST00000624298 468 ntBASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC116Q8IYX3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC116Q8IYX3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CCDC116Q8IYX3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC116Q8IYX3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC116Q8IYX3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC116Q8IYX3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC116Q8IYX3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC116Q8IYX3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC116Q8IYX3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC116Q8IYX3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCDC116Q8IYX3 KRT18P27-201ENST00000427733 1299 ntBASIC15.97■□□□□ 0.15
CCDC116Q8IYX3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms