Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 AC087163.2-201ENST00000457299 853 ntBASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 AC010327.4-202ENST00000591484 748 ntBASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 AC010507.1-201ENST00000633895 436 ntBASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM48Q8IWZ4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 YBX2P1-201ENST00000394192 760 ntBASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 IGLL3P-201ENST00000412472 434 ntBASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 AC004832.2-201ENST00000426397 482 ntBASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 PAWRP1-201ENST00000451083 565 ntBASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 CXCL1P1-201ENST00000502804 216 ntBASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 AC096734.2-201ENST00000562054 433 ntBASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 MTDHP5-201ENST00000598980 586 ntBASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 AC006538.3-201ENST00000612495 578 ntBASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 AC007064.4-201ENST00000637740 555 ntBASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 BCAR1-209ENST00000546196 1340 ntBASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 FLJ16779-201ENST00000612722 7638 ntBASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM48Q8IWZ4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 AC093525.9-201ENST00000624961 1746 ntBASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 OR7E47P-204ENST00000575924 449 ntBASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 EGFEM1P-202ENST00000431685 1563 ntBASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM48Q8IWZ4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms