Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC50Q8IVM0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 AC074051.2-201ENST00000565115 352 ntBASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 AC078925.2-201ENST00000624013 1973 ntBASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CCDC50Q8IVM0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC50Q8IVM0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 GPR89P-201ENST00000407924 1495 ntBASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 AP002383.4-201ENST00000442518 975 ntBASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 BNIP3P18-201ENST00000593976 575 ntBASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 AL590326.2-201ENST00000625139 305 ntBASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.95■□□□□ 0.46
CCDC50Q8IVM0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 INTS4P1-201ENST00000438455 1935 ntBASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 AC092171.3-201ENST00000610122 2651 ntBASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 RCN1P2-201ENST00000398357 915 ntBASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 FAM210CP-201ENST00000445714 574 ntBASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC50Q8IVM0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms