Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 KRT18P29-201ENST00000397031 1267 ntBASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 TSPY17P-201ENST00000450329 467 ntBASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 KRT18P6-201ENST00000555540 1265 ntBASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 CICP24-201ENST00000605464 2705 ntBASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD2Q8IV50 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 GRK6P1-201ENST00000400595 1711 ntBASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 HLA-L-209ENST00000420110 1011 ntBASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD2Q8IV50 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LYSMD2Q8IV50 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms