Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 COL6A4P2-202ENST00000504443 2753 ntBASIC9.2□□□□□ -0.94
LCA10Q71F78 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
LCA10Q71F78 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC9.2□□□□□ -0.94
LCA10Q71F78 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
LCA10Q71F78 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
LCA10Q71F78 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC9.2□□□□□ -0.94
LCA10Q71F78 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC9.2□□□□□ -0.94
LCA10Q71F78 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
LCA10Q71F78 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 AC239809.2-201ENST00000415381 517 ntBASIC9.2□□□□□ -0.94
LCA10Q71F78 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC9.2□□□□□ -0.94
LCA10Q71F78 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC9.2□□□□□ -0.94
LCA10Q71F78 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC9.2□□□□□ -0.94
LCA10Q71F78 AP003097.1-201ENST00000530657 1135 ntBASIC9.2□□□□□ -0.94
LCA10Q71F78 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC9.2□□□□□ -0.94
LCA10Q71F78 AC142086.2-201ENST00000569753 217 ntBASIC9.2□□□□□ -0.94
LCA10Q71F78 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC9.2□□□□□ -0.94
LCA10Q71F78 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC9.2□□□□□ -0.94
LCA10Q71F78 AC104771.1-201ENST00000603335 964 ntBASIC9.2□□□□□ -0.94
LCA10Q71F78 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC9.2□□□□□ -0.94
LCA10Q71F78 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC9.2□□□□□ -0.94
LCA10Q71F78 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC9.2□□□□□ -0.94
LCA10Q71F78 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC9.2□□□□□ -0.94
LCA10Q71F78 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
LCA10Q71F78 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 KRT8P45-201ENST00000414328 1447 ntBASIC9.2□□□□□ -0.94
LCA10Q71F78 KRT8P3-201ENST00000519669 1449 ntBASIC9.2□□□□□ -0.94
LCA10Q71F78 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC9.2□□□□□ -0.94
LCA10Q71F78 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC9.2□□□□□ -0.94
LCA10Q71F78 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
LCA10Q71F78 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 FLYWCH1P1-201ENST00000460917 1874 ntBASIC9.19□□□□□ -0.94
LCA10Q71F78 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC9.19□□□□□ -0.94
LCA10Q71F78 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
LCA10Q71F78 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
LCA10Q71F78 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
LCA10Q71F78 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
LCA10Q71F78 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
LCA10Q71F78 GAS7-202ENST00000396115 929 ntTSL 5 BASIC9.19□□□□□ -0.94
LCA10Q71F78 KRASP1-201ENST00000407852 552 ntBASIC9.19□□□□□ -0.94
LCA10Q71F78 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC9.19□□□□□ -0.94
LCA10Q71F78 PTPA-216ENST00000432651 857 ntTSL 2 BASIC9.19□□□□□ -0.94
LCA10Q71F78 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC9.19□□□□□ -0.94
LCA10Q71F78 KRT16P5-201ENST00000455284 522 ntBASIC9.19□□□□□ -0.94
LCA10Q71F78 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC9.19□□□□□ -0.94
LCA10Q71F78 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
LCA10Q71F78 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC9.19□□□□□ -0.94
LCA10Q71F78 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC9.19□□□□□ -0.94
LCA10Q71F78 AC131212.4-201ENST00000623606 975 ntBASIC9.19□□□□□ -0.94
LCA10Q71F78 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC9.19□□□□□ -0.94
LCA10Q71F78 AL023875.1-201ENST00000640777 796 ntBASIC9.19□□□□□ -0.94
LCA10Q71F78 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC9.19□□□□□ -0.94
LCA10Q71F78 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC9.19□□□□□ -0.94
LCA10Q71F78 CICP23-201ENST00000605013 2741 ntBASIC9.19□□□□□ -0.94
LCA10Q71F78 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
LCA10Q71F78 AC145098.2-201ENST00000623593 3026 ntBASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms