Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 AC124864.1-201ENST00000623408 392 ntBASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTCHD4Q6ZW05 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
PTCHD4Q6ZW05 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 AL596257.1-201ENST00000641463 2694 ntBASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 AC125634.1-201ENST00000438758 1403 ntBASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 AC005336.2-201ENST00000593183 939 ntBASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 AL353801.3-201ENST00000609898 542 ntBASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PTCHD4Q6ZW05 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PTCHD4Q6ZW05 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms