Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC4Q6S5L8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 SAPCD2P3-201ENST00000455031 850 ntBASIC19.09■□□□□ 0.65
SHC4Q6S5L8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 SLC25A6P2-201ENST00000497974 877 ntBASIC19.09■□□□□ 0.65
SHC4Q6S5L8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.09■□□□□ 0.65
SHC4Q6S5L8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.08■□□□□ 0.65
SHC4Q6S5L8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHC4Q6S5L8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHC4Q6S5L8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SHC4Q6S5L8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.08■□□□□ 0.65
SHC4Q6S5L8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.08■□□□□ 0.65
SHC4Q6S5L8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.08■□□□□ 0.65
SHC4Q6S5L8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHC4Q6S5L8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SHC4Q6S5L8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
SHC4Q6S5L8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 MIR4492-201ENST00000581627 80 ntBASIC19.08■□□□□ 0.64
SHC4Q6S5L8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 AL671710.1-201ENST00000610245 2349 ntBASIC19.08■□□□□ 0.64
SHC4Q6S5L8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SHC4Q6S5L8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 UNC93B7-201ENST00000509439 705 ntBASIC19.07■□□□□ 0.64
SHC4Q6S5L8 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 MPDU1-223ENST00000582151 728 ntBASIC19.07■□□□□ 0.64
SHC4Q6S5L8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 CLEC4GP1-201ENST00000596555 870 ntBASIC19.07■□□□□ 0.64
SHC4Q6S5L8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SHC4Q6S5L8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.07■□□□□ 0.64
SHC4Q6S5L8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms