Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 LINC00895-201ENST00000629028 1637 ntBASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 PRYP6-201ENST00000514804 343 ntBASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LYSMD4Q5XG99 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 LINC00896-202ENST00000609602 2128 ntBASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD4Q5XG99 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 CETN4P-206ENST00000642099 2168 ntBASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 AC093525.9-201ENST00000624961 1746 ntBASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 ATP5G2P4-201ENST00000442175 420 ntBASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 AC009477.1-201ENST00000452936 217 ntBASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LYSMD4Q5XG99 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms