Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 PCDHA14-201ENST00000506751 2298 ntBASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 PMS2P1-201ENST00000431037 1228 ntBASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 AC079776.4-201ENST00000511039 504 ntBASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 MIR4751-201ENST00000578027 74 ntBASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 MIR4492-201ENST00000581627 80 ntBASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 AC010654.1-201ENST00000615722 808 ntBASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PTPN20Q4JDL3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 AC129492.6-201ENST00000611383 1305 ntBASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 AC026396.1-201ENST00000419388 421 ntBASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 SNX33P1-201ENST00000592116 1762 ntBASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
PTPN20Q4JDL3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 IGLL3P-201ENST00000412472 434 ntBASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 PRSS29P-201ENST00000440800 595 ntBASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 AC091167.2-201ENST00000579581 588 ntBASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.79■□□□□ 0.44
PTPN20Q4JDL3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms