Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC96Q2M329 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC96Q2M329 AC106820.2-201ENST00000563775 3264 ntBASIC19.71■□□□□ 0.75
CCDC96Q2M329 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC96Q2M329 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC96Q2M329 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC96Q2M329 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC96Q2M329 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC96Q2M329 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC96Q2M329 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC96Q2M329 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC96Q2M329 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC96Q2M329 AL031432.2-201ENST00000566714 459 ntBASIC19.71■□□□□ 0.75
CCDC96Q2M329 AL928711.1-201ENST00000570165 459 ntBASIC19.71■□□□□ 0.75
CCDC96Q2M329 AP001160.2-201ENST00000596071 487 ntBASIC19.71■□□□□ 0.75
CCDC96Q2M329 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC96Q2M329 AL645728.2-201ENST00000641974 660 ntBASIC19.71■□□□□ 0.75
CCDC96Q2M329 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC96Q2M329 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC96Q2M329 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC96Q2M329 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC96Q2M329 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC96Q2M329 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCDC96Q2M329 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC96Q2M329 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC96Q2M329 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC96Q2M329 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC96Q2M329 LINC02012-201ENST00000608206 1725 ntBASIC19.71■□□□□ 0.75
CCDC96Q2M329 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC96Q2M329 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 AC092183.1-201ENST00000469884 875 ntBASIC19.7■□□□□ 0.74
CCDC96Q2M329 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
CCDC96Q2M329 AP002472.1-201ENST00000577490 586 ntBASIC19.7■□□□□ 0.74
CCDC96Q2M329 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC96Q2M329 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC96Q2M329 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC96Q2M329 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC96Q2M329 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 AC011270.2-201ENST00000624293 2550 ntBASIC19.7■□□□□ 0.74
CCDC96Q2M329 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC96Q2M329 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC96Q2M329 AC139713.2-201ENST00000641328 2723 ntBASIC19.69■□□□□ 0.74
CCDC96Q2M329 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC96Q2M329 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC96Q2M329 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC96Q2M329 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC96Q2M329 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
CCDC96Q2M329 AP006288.1-201ENST00000446065 395 ntBASIC19.69■□□□□ 0.74
CCDC96Q2M329 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC96Q2M329 MIR4515-201ENST00000584082 81 ntBASIC19.69■□□□□ 0.74
CCDC96Q2M329 AC092902.6-201ENST00000641783 218 ntBASIC19.69■□□□□ 0.74
CCDC96Q2M329 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC96Q2M329 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC96Q2M329 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC96Q2M329 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC96Q2M329 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC96Q2M329 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC96Q2M329 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC96Q2M329 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC96Q2M329 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC96Q2M329 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC96Q2M329 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms