Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 AC060834.1-201ENST00000443027 2032 ntBASIC13.05□□□□□ -0.32
HIST1H1AQ02539 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1AQ02539 AC125634.1-201ENST00000438758 1403 ntBASIC13.05□□□□□ -0.32
HIST1H1AQ02539 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 FAM220CP-201ENST00000395253 831 ntBASIC13.04□□□□□ -0.32
HIST1H1AQ02539 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 RN7SL606P-201ENST00000472779 293 ntBASIC13.04□□□□□ -0.32
HIST1H1AQ02539 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 AL121672.3-201ENST00000608644 468 ntBASIC13.04□□□□□ -0.32
HIST1H1AQ02539 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 AL365209.1-201ENST00000624418 6473 ntBASIC13.04□□□□□ -0.32
HIST1H1AQ02539 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 AC046185.3-201ENST00000623228 1824 ntBASIC13.04□□□□□ -0.32
HIST1H1AQ02539 MIR600HG-201ENST00000449175 5984 ntBASIC13.04□□□□□ -0.32
HIST1H1AQ02539 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1AQ02539 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 AGGF1P2-201ENST00000426656 2106 ntBASIC13.03□□□□□ -0.32
HIST1H1AQ02539 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 AL121956.5-201ENST00000625261 221 ntBASIC13.03□□□□□ -0.32
HIST1H1AQ02539 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HIST1H1AQ02539 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms