Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.62■□□□□ 0.25
CDK3Q00526 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CDK3Q00526 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.62■□□□□ 0.25
CDK3Q00526 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.62■□□□□ 0.25
CDK3Q00526 U1.21-201ENST00000580816 167 ntBASIC16.62■□□□□ 0.25
CDK3Q00526 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.62■□□□□ 0.25
CDK3Q00526 AL009183.1-201ENST00000603760 355 ntBASIC16.62■□□□□ 0.25
CDK3Q00526 AL596442.2-201ENST00000610240 980 ntBASIC16.62■□□□□ 0.25
CDK3Q00526 AC106820.2-201ENST00000563775 3264 ntBASIC16.62■□□□□ 0.25
CDK3Q00526 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CDK3Q00526 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK3Q00526 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK3Q00526 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK3Q00526 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK3Q00526 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK3Q00526 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDK3Q00526 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDK3Q00526 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDK3Q00526 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDK3Q00526 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.62■□□□□ 0.25
CDK3Q00526 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK3Q00526 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.61■□□□□ 0.25
CDK3Q00526 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK3Q00526 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDK3Q00526 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.61■□□□□ 0.25
CDK3Q00526 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CDK3Q00526 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDK3Q00526 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK3Q00526 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDK3Q00526 ADH5P3-201ENST00000433842 1137 ntBASIC16.61■□□□□ 0.25
CDK3Q00526 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDK3Q00526 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.61■□□□□ 0.25
CDK3Q00526 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.61■□□□□ 0.25
CDK3Q00526 AC092183.1-201ENST00000469884 875 ntBASIC16.61■□□□□ 0.25
CDK3Q00526 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.61■□□□□ 0.25
CDK3Q00526 AC109635.5-201ENST00000533593 962 ntBASIC16.61■□□□□ 0.25
CDK3Q00526 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDK3Q00526 SNHG9-202ENST00000564014 471 ntBASIC16.61■□□□□ 0.25
CDK3Q00526 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.61■□□□□ 0.25
CDK3Q00526 CYP2A7P1-201ENST00000595391 815 ntBASIC16.61■□□□□ 0.25
CDK3Q00526 AL031055.1-201ENST00000606362 631 ntBASIC16.61■□□□□ 0.25
CDK3Q00526 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDK3Q00526 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CDK3Q00526 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CDK3Q00526 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.61■□□□□ 0.25
CDK3Q00526 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDK3Q00526 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK3Q00526 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK3Q00526 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK3Q00526 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.6■□□□□ 0.25
CDK3Q00526 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.6■□□□□ 0.25
CDK3Q00526 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK3Q00526 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
CDK3Q00526 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.6■□□□□ 0.25
CDK3Q00526 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDK3Q00526 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK3Q00526 AL355306.1-201ENST00000415580 579 ntBASIC16.6■□□□□ 0.25
CDK3Q00526 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.6■□□□□ 0.25
CDK3Q00526 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.6■□□□□ 0.25
CDK3Q00526 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.6■□□□□ 0.25
CDK3Q00526 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
CDK3Q00526 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.6■□□□□ 0.25
CDK3Q00526 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.6■□□□□ 0.25
CDK3Q00526 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CDK3Q00526 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.6■□□□□ 0.25
CDK3Q00526 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.6■□□□□ 0.25
CDK3Q00526 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
CDK3Q00526 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK3Q00526 PCDHB17P-201ENST00000539533 2393 ntBASIC16.6■□□□□ 0.25
CDK3Q00526 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK3Q00526 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CDK3Q00526 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.6■□□□□ 0.25
CDK3Q00526 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.6■□□□□ 0.25
CDK3Q00526 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK3Q00526 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDK3Q00526 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDK3Q00526 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDK3Q00526 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
CDK3Q00526 LETM1P2-201ENST00000597330 2178 ntBASIC16.6■□□□□ 0.25
CDK3Q00526 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.6■□□□□ 0.25
CDK3Q00526 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.6■□□□□ 0.25
CDK3Q00526 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDK3Q00526 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDK3Q00526 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK3Q00526 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDK3Q00526 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.59■□□□□ 0.25
CDK3Q00526 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK3Q00526 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.59■□□□□ 0.25
CDK3Q00526 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.59■□□□□ 0.25
CDK3Q00526 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK3Q00526 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK3Q00526 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CDK3Q00526 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDK3Q00526 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.59■□□□□ 0.25
CDK3Q00526 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK3Q00526 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.59■□□□□ 0.25
CDK3Q00526 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDK3Q00526 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.59■□□□□ 0.25
CDK3Q00526 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.59■□□□□ 0.25
CDK3Q00526 CNN2P11-201ENST00000429351 262 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms