Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
HSPG2P98160 SPDYE17-201ENST00000412399 783 ntBASIC10.3□□□□□ -0.76
HSPG2P98160 MEP1AP4-201ENST00000423244 1087 ntBASIC10.3□□□□□ -0.76
HSPG2P98160 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC10.3□□□□□ -0.76
HSPG2P98160 RN7SL828P-201ENST00000607615 303 ntBASIC10.3□□□□□ -0.76
HSPG2P98160 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC10.3□□□□□ -0.76
HSPG2P98160 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
HSPG2P98160 LOX-206ENST00000639739 1626 ntTSL 5 BASIC10.3□□□□□ -0.76
HSPG2P98160 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC10.3□□□□□ -0.76
HSPG2P98160 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
HSPG2P98160 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC10.3□□□□□ -0.76
HSPG2P98160 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 AL627389.1-201ENST00000413508 1182 ntBASIC10.3□□□□□ -0.76
HSPG2P98160 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC10.3□□□□□ -0.76
HSPG2P98160 RPL17P11-201ENST00000417593 544 ntBASIC10.3□□□□□ -0.76
HSPG2P98160 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
HSPG2P98160 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC10.3□□□□□ -0.76
HSPG2P98160 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
HSPG2P98160 CHMP4BP1-201ENST00000556017 588 ntBASIC10.3□□□□□ -0.76
HSPG2P98160 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC10.3□□□□□ -0.76
HSPG2P98160 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC10.3□□□□□ -0.76
HSPG2P98160 MIR33B-201ENST00000385104 96 ntBASIC10.3□□□□□ -0.76
HSPG2P98160 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC10.3□□□□□ -0.76
HSPG2P98160 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC10.3□□□□□ -0.76
HSPG2P98160 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC10.3□□□□□ -0.76
HSPG2P98160 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC10.3□□□□□ -0.76
HSPG2P98160 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC10.3□□□□□ -0.76
HSPG2P98160 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC10.3□□□□□ -0.76
HSPG2P98160 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC10.3□□□□□ -0.76
HSPG2P98160 CYP2A7P1-201ENST00000595391 815 ntBASIC10.3□□□□□ -0.76
HSPG2P98160 AL033527.5-202ENST00000641632 1098 ntBASIC10.3□□□□□ -0.76
HSPG2P98160 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
HSPG2P98160 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC10.29□□□□□ -0.76
HSPG2P98160 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 KRT90P-201ENST00000549264 1064 ntBASIC10.29□□□□□ -0.76
HSPG2P98160 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC10.29□□□□□ -0.76
HSPG2P98160 DUX4L45-201ENST00000566406 1057 ntBASIC10.29□□□□□ -0.76
HSPG2P98160 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC10.29□□□□□ -0.76
HSPG2P98160 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC10.29□□□□□ -0.76
HSPG2P98160 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 KRT8P12-202ENST00000472924 1397 ntBASIC10.29□□□□□ -0.76
HSPG2P98160 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC10.29□□□□□ -0.76
HSPG2P98160 AL355334.1-201ENST00000417713 215 ntBASIC10.29□□□□□ -0.76
HSPG2P98160 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC10.29□□□□□ -0.76
HSPG2P98160 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC10.29□□□□□ -0.76
HSPG2P98160 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC10.29□□□□□ -0.76
HSPG2P98160 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC10.29□□□□□ -0.76
HSPG2P98160 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC10.29□□□□□ -0.76
HSPG2P98160 IGF1-203ENST00000392904 761 ntTSL 5 BASIC10.29□□□□□ -0.76
HSPG2P98160 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
HSPG2P98160 HIST2H2BC-201ENST00000498492 580 ntBASIC10.29□□□□□ -0.76
HSPG2P98160 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
HSPG2P98160 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
HSPG2P98160 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC10.28□□□□□ -0.76
HSPG2P98160 STK4-201ENST00000372801 2038 ntTSL 2 BASIC10.28□□□□□ -0.76
HSPG2P98160 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC10.28□□□□□ -0.76
HSPG2P98160 BX284668.4-201ENST00000453917 508 ntBASIC10.28□□□□□ -0.76
HSPG2P98160 TSACC-208ENST00000481479 741 ntTSL 2 BASIC10.28□□□□□ -0.76
HSPG2P98160 SDHAP3-202ENST00000515467 728 ntBASIC10.28□□□□□ -0.76
HSPG2P98160 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HSPG2P98160 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC10.28□□□□□ -0.76
HSPG2P98160 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC10.28□□□□□ -0.76
HSPG2P98160 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC10.28□□□□□ -0.76
HSPG2P98160 AC131009.4-201ENST00000624048 1740 ntBASIC10.28□□□□□ -0.76
HSPG2P98160 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HSPG2P98160 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
HSPG2P98160 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC10.28□□□□□ -0.76
HSPG2P98160 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms