Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
IRX3P78415 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IRX3P78415 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX3P78415 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.72■□□□□ 0.75
IRX3P78415 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.72■□□□□ 0.75
IRX3P78415 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX3P78415 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX3P78415 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.72■□□□□ 0.75
IRX3P78415 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IRX3P78415 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.71■□□□□ 0.75
IRX3P78415 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
IRX3P78415 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.71■□□□□ 0.75
IRX3P78415 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.71■□□□□ 0.75
IRX3P78415 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
IRX3P78415 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.71■□□□□ 0.75
IRX3P78415 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.71■□□□□ 0.75
IRX3P78415 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.71■□□□□ 0.75
IRX3P78415 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.71■□□□□ 0.75
IRX3P78415 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.71■□□□□ 0.75
IRX3P78415 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.71■□□□□ 0.75
IRX3P78415 DUX4L17-201ENST00000557360 1267 ntBASIC19.71■□□□□ 0.75
IRX3P78415 AC138761.1-201ENST00000584393 385 ntBASIC19.71■□□□□ 0.75
IRX3P78415 AJ011932.1-201ENST00000621707 465 ntBASIC19.71■□□□□ 0.75
IRX3P78415 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.71■□□□□ 0.75
IRX3P78415 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.71■□□□□ 0.75
IRX3P78415 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
IRX3P78415 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
IRX3P78415 AL162727.3-201ENST00000635661 2787 ntBASIC19.7■□□□□ 0.74
IRX3P78415 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
IRX3P78415 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
IRX3P78415 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.7■□□□□ 0.74
IRX3P78415 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.7■□□□□ 0.74
IRX3P78415 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.7■□□□□ 0.74
IRX3P78415 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.7■□□□□ 0.74
IRX3P78415 AC005412.3-201ENST00000580309 715 ntBASIC19.7■□□□□ 0.74
IRX3P78415 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.7■□□□□ 0.74
IRX3P78415 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.7■□□□□ 0.74
IRX3P78415 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
IRX3P78415 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.7■□□□□ 0.74
IRX3P78415 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.7■□□□□ 0.74
IRX3P78415 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.7■□□□□ 0.74
IRX3P78415 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
IRX3P78415 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
IRX3P78415 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.7■□□□□ 0.74
IRX3P78415 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
IRX3P78415 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
IRX3P78415 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.69■□□□□ 0.74
IRX3P78415 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
IRX3P78415 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
IRX3P78415 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.69■□□□□ 0.74
IRX3P78415 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
IRX3P78415 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.69■□□□□ 0.74
IRX3P78415 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
IRX3P78415 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.69■□□□□ 0.74
IRX3P78415 HMGA1P7-201ENST00000406908 502 ntBASIC19.69■□□□□ 0.74
IRX3P78415 FAM58DP-201ENST00000428076 619 ntBASIC19.69■□□□□ 0.74
IRX3P78415 INGX-202ENST00000489074 768 ntBASIC19.69■□□□□ 0.74
IRX3P78415 IGHV3-62-201ENST00000520057 340 ntBASIC19.69■□□□□ 0.74
IRX3P78415 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms