Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CLDN2P57739 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN2P57739 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CLDN2P57739 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 OR6D1P-202ENST00000641007 5290 ntBASIC16.67■□□□□ 0.26
CLDN2P57739 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLDN2P57739 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN2P57739 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.67■□□□□ 0.26
CLDN2P57739 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN2P57739 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN2P57739 FAM58DP-201ENST00000428076 619 ntBASIC16.67■□□□□ 0.26
CLDN2P57739 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN2P57739 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN2P57739 RN7SL589P-201ENST00000481268 310 ntBASIC16.67■□□□□ 0.26
CLDN2P57739 AC069335.1-201ENST00000489972 472 ntBASIC16.67■□□□□ 0.26
CLDN2P57739 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN2P57739 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.67■□□□□ 0.26
CLDN2P57739 AC025678.2-201ENST00000562061 970 ntBASIC16.67■□□□□ 0.26
CLDN2P57739 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 AC091167.2-201ENST00000579581 588 ntBASIC16.67■□□□□ 0.26
CLDN2P57739 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.67■□□□□ 0.26
CLDN2P57739 MPDU1-223ENST00000582151 728 ntBASIC16.67■□□□□ 0.26
CLDN2P57739 AC009093.7-201ENST00000623853 1223 ntBASIC16.67■□□□□ 0.26
CLDN2P57739 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CLDN2P57739 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CLDN2P57739 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.67■□□□□ 0.26
CLDN2P57739 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.67■□□□□ 0.26
CLDN2P57739 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLDN2P57739 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN2P57739 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLDN2P57739 MIR770-201ENST00000390219 98 ntBASIC16.66■□□□□ 0.26
CLDN2P57739 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 AC092474.2-201ENST00000424288 719 ntBASIC16.66■□□□□ 0.26
CLDN2P57739 SPCS2P4-201ENST00000436160 681 ntBASIC16.66■□□□□ 0.26
CLDN2P57739 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN2P57739 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.66■□□□□ 0.26
CLDN2P57739 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CLDN2P57739 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CLDN2P57739 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN2P57739 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
CLDN2P57739 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.66■□□□□ 0.26
CLDN2P57739 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.66■□□□□ 0.26
CLDN2P57739 AC087641.1-201ENST00000557561 1021 ntBASIC16.66■□□□□ 0.26
CLDN2P57739 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.66■□□□□ 0.26
CLDN2P57739 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 AL031055.1-201ENST00000606362 631 ntBASIC16.66■□□□□ 0.26
CLDN2P57739 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 AC131009.4-201ENST00000624048 1740 ntBASIC16.66■□□□□ 0.26
CLDN2P57739 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.66■□□□□ 0.26
CLDN2P57739 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.66■□□□□ 0.26
CLDN2P57739 AKAP8P1-201ENST00000434743 1349 ntBASIC16.66■□□□□ 0.26
CLDN2P57739 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 LINC00896-202ENST00000609602 2128 ntBASIC16.66■□□□□ 0.26
CLDN2P57739 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLDN2P57739 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CLDN2P57739 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN2P57739 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN2P57739 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.65■□□□□ 0.26
CLDN2P57739 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.65■□□□□ 0.26
CLDN2P57739 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CLDN2P57739 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CLDN2P57739 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 AC092053.1-201ENST00000605787 1936 ntBASIC16.65■□□□□ 0.26
CLDN2P57739 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLDN2P57739 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms