Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
WNT3P56703 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.03■□□□□ 0.16
WNT3P56703 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3P56703 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3P56703 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.03■□□□□ 0.16
WNT3P56703 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
WNT3P56703 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.03■□□□□ 0.16
WNT3P56703 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3P56703 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3P56703 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
WNT3P56703 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.03■□□□□ 0.16
WNT3P56703 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3P56703 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3P56703 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3P56703 HLA-J-202ENST00000469281 1241 ntBASIC16.03■□□□□ 0.16
WNT3P56703 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
WNT3P56703 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.03■□□□□ 0.16
WNT3P56703 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.03■□□□□ 0.16
WNT3P56703 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
WNT3P56703 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.03■□□□□ 0.16
WNT3P56703 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3P56703 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.03■□□□□ 0.16
WNT3P56703 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
WNT3P56703 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
WNT3P56703 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
WNT3P56703 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.03■□□□□ 0.16
WNT3P56703 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
WNT3P56703 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
WNT3P56703 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.02■□□□□ 0.16
WNT3P56703 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
WNT3P56703 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.02■□□□□ 0.16
WNT3P56703 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
WNT3P56703 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
WNT3P56703 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 AC006277.1-201ENST00000624348 1610 ntBASIC16.02■□□□□ 0.16
WNT3P56703 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
WNT3P56703 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
WNT3P56703 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.02■□□□□ 0.16
WNT3P56703 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
WNT3P56703 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.02■□□□□ 0.16
WNT3P56703 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.02■□□□□ 0.16
WNT3P56703 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.02■□□□□ 0.16
WNT3P56703 AC013467.2-201ENST00000605472 835 ntBASIC16.02■□□□□ 0.16
WNT3P56703 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.02■□□□□ 0.16
WNT3P56703 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.02■□□□□ 0.16
WNT3P56703 AL022326.1-202ENST00000641533 845 ntBASIC16.02■□□□□ 0.16
WNT3P56703 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
WNT3P56703 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT3P56703 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT3P56703 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT3P56703 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT3P56703 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT3P56703 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.02■□□□□ 0.15
WNT3P56703 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
WNT3P56703 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT3P56703 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
WNT3P56703 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.02■□□□□ 0.15
WNT3P56703 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3P56703 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3P56703 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.01■□□□□ 0.15
WNT3P56703 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.01■□□□□ 0.15
WNT3P56703 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3P56703 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.01■□□□□ 0.15
WNT3P56703 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3P56703 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
WNT3P56703 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.01■□□□□ 0.15
WNT3P56703 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3P56703 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3P56703 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3P56703 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3P56703 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3P56703 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
WNT3P56703 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.01■□□□□ 0.15
WNT3P56703 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3P56703 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.01■□□□□ 0.15
WNT3P56703 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.01■□□□□ 0.15
WNT3P56703 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.01■□□□□ 0.15
WNT3P56703 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3P56703 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
WNT3P56703 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.01■□□□□ 0.15
WNT3P56703 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
WNT3P56703 AC148477.8-201ENST00000624298 468 ntBASIC16.01■□□□□ 0.15
WNT3P56703 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms