Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
CMC4P56277 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.61□□□□□ -0.39
CMC4P56277 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CMC4P56277 HCG4B-203ENST00000450128 991 ntBASIC12.61□□□□□ -0.39
CMC4P56277 AL513480.1-201ENST00000451731 511 ntBASIC12.61□□□□□ -0.39
CMC4P56277 AC087641.1-201ENST00000557561 1021 ntBASIC12.61□□□□□ -0.39
CMC4P56277 AC040169.1-201ENST00000565382 521 ntBASIC12.61□□□□□ -0.39
CMC4P56277 AL031432.2-201ENST00000566714 459 ntBASIC12.61□□□□□ -0.39
CMC4P56277 AL928711.1-201ENST00000570165 459 ntBASIC12.61□□□□□ -0.39
CMC4P56277 MIR4515-201ENST00000584082 81 ntBASIC12.61□□□□□ -0.39
CMC4P56277 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.61□□□□□ -0.39
CMC4P56277 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC12.61□□□□□ -0.39
CMC4P56277 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.61□□□□□ -0.39
CMC4P56277 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.61□□□□□ -0.39
CMC4P56277 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
CMC4P56277 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.61□□□□□ -0.39
CMC4P56277 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CMC4P56277 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CMC4P56277 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.6□□□□□ -0.39
CMC4P56277 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CMC4P56277 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CMC4P56277 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.6□□□□□ -0.39
CMC4P56277 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
CMC4P56277 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.6□□□□□ -0.39
CMC4P56277 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CMC4P56277 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.6□□□□□ -0.39
CMC4P56277 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.6□□□□□ -0.39
CMC4P56277 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.6□□□□□ -0.39
CMC4P56277 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 AL121761.2-201ENST00000598007 1648 ntBASIC12.6□□□□□ -0.39
CMC4P56277 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.6□□□□□ -0.39
CMC4P56277 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CMC4P56277 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
CMC4P56277 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.6□□□□□ -0.39
CMC4P56277 SLC25A6P2-201ENST00000497974 877 ntBASIC12.6□□□□□ -0.39
CMC4P56277 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.6□□□□□ -0.39
CMC4P56277 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.6□□□□□ -0.39
CMC4P56277 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
CMC4P56277 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.6□□□□□ -0.39
CMC4P56277 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.6□□□□□ -0.39
CMC4P56277 AC064836.3-201ENST00000607928 673 ntBASIC12.6□□□□□ -0.39
CMC4P56277 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.6□□□□□ -0.39
CMC4P56277 REXO1L3P-201ENST00000622202 1288 ntBASIC12.6□□□□□ -0.39
CMC4P56277 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.6□□□□□ -0.39
CMC4P56277 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.6□□□□□ -0.39
CMC4P56277 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.6□□□□□ -0.39
CMC4P56277 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.6□□□□□ -0.39
CMC4P56277 LETM1P2-201ENST00000597330 2178 ntBASIC12.6□□□□□ -0.39
CMC4P56277 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CMC4P56277 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.6□□□□□ -0.39
CMC4P56277 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.6□□□□□ -0.39
CMC4P56277 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 PMS2P7-201ENST00000506558 1336 ntBASIC12.6□□□□□ -0.39
CMC4P56277 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CMC4P56277 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
CMC4P56277 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC12.59□□□□□ -0.39
CMC4P56277 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.59□□□□□ -0.39
CMC4P56277 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms