Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC34P49427 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.44□□□□□ -0.26
CDC34P49427 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CDC34P49427 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.44□□□□□ -0.26
CDC34P49427 AC104640.1-201ENST00000562617 2109 ntBASIC13.44□□□□□ -0.26
CDC34P49427 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.44□□□□□ -0.26
CDC34P49427 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC34P49427 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.44□□□□□ -0.26
CDC34P49427 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.44□□□□□ -0.26
CDC34P49427 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.44□□□□□ -0.26
CDC34P49427 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.44□□□□□ -0.26
CDC34P49427 AC026471.5-201ENST00000615068 467 ntBASIC13.44□□□□□ -0.26
CDC34P49427 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC34P49427 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 AC113410.3-201ENST00000623366 203 ntBASIC13.44□□□□□ -0.26
CDC34P49427 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CDC34P49427 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.44□□□□□ -0.26
CDC34P49427 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CDC34P49427 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CDC34P49427 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.44□□□□□ -0.26
CDC34P49427 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.44□□□□□ -0.26
CDC34P49427 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDC34P49427 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC34P49427 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CDC34P49427 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC34P49427 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC34P49427 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC34P49427 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.43□□□□□ -0.26
CDC34P49427 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CDC34P49427 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
CDC34P49427 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CDC34P49427 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.43□□□□□ -0.26
CDC34P49427 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.43□□□□□ -0.26
CDC34P49427 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC34P49427 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.43□□□□□ -0.26
CDC34P49427 AL512604.3-201ENST00000569583 964 ntBASIC13.43□□□□□ -0.26
CDC34P49427 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CDC34P49427 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.43□□□□□ -0.26
CDC34P49427 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.43□□□□□ -0.26
CDC34P49427 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
CDC34P49427 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CDC34P49427 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CDC34P49427 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.43□□□□□ -0.26
CDC34P49427 FRMD8P1-201ENST00000440433 1524 ntBASIC13.43□□□□□ -0.26
CDC34P49427 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.43□□□□□ -0.26
CDC34P49427 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.43□□□□□ -0.26
CDC34P49427 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CDC34P49427 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CDC34P49427 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDC34P49427 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.43□□□□□ -0.26
CDC34P49427 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.42□□□□□ -0.26
CDC34P49427 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.42□□□□□ -0.26
CDC34P49427 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.42□□□□□ -0.26
CDC34P49427 TUBB8P12-201ENST00000308911 1335 ntBASIC13.42□□□□□ -0.26
CDC34P49427 TUBB7P-202ENST00000428444 1305 ntBASIC13.42□□□□□ -0.26
CDC34P49427 TUBB8P7-204ENST00000567960 1332 ntBASIC13.42□□□□□ -0.26
CDC34P49427 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
CDC34P49427 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.42□□□□□ -0.26
CDC34P49427 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CDC34P49427 AC023824.1-201ENST00000562945 2975 ntBASIC13.42□□□□□ -0.26
CDC34P49427 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms