Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 AP002490.2-201ENST00000524791 560 ntBASIC15.1■□□□□ 0.01
CSNK1A1P48729 AP002469.2-201ENST00000531724 424 ntBASIC15.1■□□□□ 0.01
CSNK1A1P48729 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 AC105339.3-201ENST00000560043 636 ntBASIC15.1■□□□□ 0.01
CSNK1A1P48729 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CSNK1A1P48729 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1A1P48729 AC124067.4-201ENST00000519691 2379 ntBASIC15.1■□□□□ 0.01
CSNK1A1P48729 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CSNK1A1P48729 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
CSNK1A1P48729 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CSNK1A1P48729 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CSNK1A1P48729 AC084018.2-201ENST00000613093 2607 ntBASIC15.09■□□□□ 0.01
CSNK1A1P48729 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CSNK1A1P48729 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.09■□□□□ 0.01
CSNK1A1P48729 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.09■□□□□ 0.01
CSNK1A1P48729 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.09■□□□□ 0.01
CSNK1A1P48729 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.09■□□□□ 0.01
CSNK1A1P48729 KRT18P27-201ENST00000427733 1299 ntBASIC15.09■□□□□ 0.01
CSNK1A1P48729 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.09■□□□□ 0.01
CSNK1A1P48729 HNRNPDP1-201ENST00000439535 754 ntBASIC15.09■□□□□ 0.01
CSNK1A1P48729 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 RPS15P9-201ENST00000494093 319 ntBASIC15.09■□□□□ 0.01
CSNK1A1P48729 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 AL160237.2-201ENST00000556165 472 ntBASIC15.09■□□□□ 0.01
CSNK1A1P48729 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.09■□□□□ 0.01
CSNK1A1P48729 AL773604.1-201ENST00000617417 272 ntBASIC15.09■□□□□ 0.01
CSNK1A1P48729 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.09■□□□□ 0.01
CSNK1A1P48729 AF228730.7-201ENST00000641842 219 ntBASIC15.09■□□□□ 0.01
CSNK1A1P48729 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
CSNK1A1P48729 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.09■□□□□ 0.01
CSNK1A1P48729 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CSNK1A1P48729 AC106886.4-201ENST00000623557 2502 ntBASIC15.09■□□□□ 0.01
CSNK1A1P48729 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.09■□□□□ 0.01
CSNK1A1P48729 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1A1P48729 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
CSNK1A1P48729 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms