Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AL671710.1-201ENST00000610245 2349 ntBASIC19.89■□□□□ 0.78
NEDD4P46934 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
NEDD4P46934 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
NEDD4P46934 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.89■□□□□ 0.78
NEDD4P46934 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD4P46934 AL391256.1-201ENST00000443260 1855 ntBASIC19.89■□□□□ 0.77
NEDD4P46934 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD4P46934 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NEDD4P46934 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
NEDD4P46934 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD4P46934 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD4P46934 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NEDD4P46934 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.89■□□□□ 0.77
NEDD4P46934 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.89■□□□□ 0.77
NEDD4P46934 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.89■□□□□ 0.77
NEDD4P46934 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
NEDD4P46934 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.89■□□□□ 0.77
NEDD4P46934 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.89■□□□□ 0.77
NEDD4P46934 MIR4515-201ENST00000584082 81 ntBASIC19.89■□□□□ 0.77
NEDD4P46934 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD4P46934 CYP2A7P1-201ENST00000595391 815 ntBASIC19.89■□□□□ 0.77
NEDD4P46934 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.89■□□□□ 0.77
NEDD4P46934 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NEDD4P46934 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD4P46934 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.89■□□□□ 0.77
NEDD4P46934 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD4P46934 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD4P46934 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD4P46934 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.89■□□□□ 0.77
NEDD4P46934 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NEDD4P46934 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD4P46934 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD4P46934 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NEDD4P46934 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
NEDD4P46934 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEDD4P46934 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEDD4P46934 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEDD4P46934 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEDD4P46934 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEDD4P46934 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEDD4P46934 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
NEDD4P46934 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.88■□□□□ 0.77
NEDD4P46934 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEDD4P46934 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
NEDD4P46934 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.88■□□□□ 0.77
NEDD4P46934 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.88■□□□□ 0.77
NEDD4P46934 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.88■□□□□ 0.77
NEDD4P46934 AC002347.1-201ENST00000569543 541 ntBASIC19.88■□□□□ 0.77
NEDD4P46934 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.88■□□□□ 0.77
NEDD4P46934 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.88■□□□□ 0.77
NEDD4P46934 AC013467.2-201ENST00000605472 835 ntBASIC19.88■□□□□ 0.77
NEDD4P46934 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.88■□□□□ 0.77
NEDD4P46934 AC007064.4-201ENST00000637740 555 ntBASIC19.88■□□□□ 0.77
NEDD4P46934 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.88■□□□□ 0.77
NEDD4P46934 AC012569.1-201ENST00000591191 1524 ntBASIC19.88■□□□□ 0.77
NEDD4P46934 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEDD4P46934 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.88■□□□□ 0.77
NEDD4P46934 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NEDD4P46934 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEDD4P46934 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
NEDD4P46934 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.88■□□□□ 0.77
NEDD4P46934 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEDD4P46934 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEDD4P46934 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEDD4P46934 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEDD4P46934 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEDD4P46934 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEDD4P46934 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
NEDD4P46934 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.87■□□□□ 0.77
NEDD4P46934 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NEDD4P46934 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
NEDD4P46934 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.87■□□□□ 0.77
NEDD4P46934 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.87■□□□□ 0.77
NEDD4P46934 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 HCG4-201ENST00000418983 998 ntBASIC19.87■□□□□ 0.77
NEDD4P46934 AC004832.2-201ENST00000426397 482 ntBASIC19.87■□□□□ 0.77
NEDD4P46934 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
NEDD4P46934 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.87■□□□□ 0.77
NEDD4P46934 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.87■□□□□ 0.77
NEDD4P46934 AC087641.1-201ENST00000557561 1021 ntBASIC19.87■□□□□ 0.77
NEDD4P46934 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
NEDD4P46934 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.87■□□□□ 0.77
NEDD4P46934 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.87■□□□□ 0.77
NEDD4P46934 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.87■□□□□ 0.77
NEDD4P46934 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NEDD4P46934 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.87■□□□□ 0.77
NEDD4P46934 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEDD4P46934 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms