Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.27■■□□□ 1
COL15A1P39059 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL15A1P39059 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC21.27■■□□□ 1
COL15A1P39059 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
COL15A1P39059 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21.27■■□□□ 1
COL15A1P39059 AC022144.1-201ENST00000602255 1580 ntBASIC21.27■■□□□ 1
COL15A1P39059 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL15A1P39059 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL15A1P39059 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL15A1P39059 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.27■■□□□ 1
COL15A1P39059 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC21.27■■□□□ 1
COL15A1P39059 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.27■■□□□ 1
COL15A1P39059 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.27■■□□□ 1
COL15A1P39059 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.27■■□□□ 1
COL15A1P39059 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL15A1P39059 COQ6-210ENST00000554920 649 ntTSL 3 BASIC21.27■■□□□ 1
COL15A1P39059 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.27■■□□□ 1
COL15A1P39059 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC21.27■■□□□ 1
COL15A1P39059 AC073389.1-201ENST00000595595 795 ntBASIC21.27■■□□□ 1
COL15A1P39059 AL138828.2-201ENST00000615812 383 ntBASIC21.27■■□□□ 1
COL15A1P39059 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
COL15A1P39059 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.27■■□□□ 1
COL15A1P39059 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.27■■□□□ 1
COL15A1P39059 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL15A1P39059 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL15A1P39059 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL15A1P39059 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.27■■□□□ 1
COL15A1P39059 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
COL15A1P39059 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL15A1P39059 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL15A1P39059 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL15A1P39059 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL15A1P39059 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL15A1P39059 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
COL15A1P39059 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
COL15A1P39059 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
COL15A1P39059 FOXO1B-201ENST00000504678 1527 ntBASIC21.27■□□□□ 0.99
COL15A1P39059 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL15A1P39059 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL15A1P39059 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL15A1P39059 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.26■□□□□ 0.99
COL15A1P39059 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.26■□□□□ 0.99
COL15A1P39059 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL15A1P39059 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL15A1P39059 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
COL15A1P39059 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.26■□□□□ 0.99
COL15A1P39059 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.26■□□□□ 0.99
COL15A1P39059 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.26■□□□□ 0.99
COL15A1P39059 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL15A1P39059 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.26■□□□□ 0.99
COL15A1P39059 MEIS3P1-201ENST00000495167 958 ntBASIC21.26■□□□□ 0.99
COL15A1P39059 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.26■□□□□ 0.99
COL15A1P39059 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.26■□□□□ 0.99
COL15A1P39059 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC21.26■□□□□ 0.99
COL15A1P39059 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL15A1P39059 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.26■□□□□ 0.99
COL15A1P39059 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL15A1P39059 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL15A1P39059 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.26■□□□□ 0.99
COL15A1P39059 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL15A1P39059 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
COL15A1P39059 AP3S2-216ENST00000617003 1561 ntBASIC21.26■□□□□ 0.99
COL15A1P39059 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL15A1P39059 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.26■□□□□ 0.99
COL15A1P39059 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL15A1P39059 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL15A1P39059 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL15A1P39059 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.26■□□□□ 0.99
COL15A1P39059 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
COL15A1P39059 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL15A1P39059 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL15A1P39059 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21.25■□□□□ 0.99
COL15A1P39059 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL15A1P39059 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL15A1P39059 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL15A1P39059 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL15A1P39059 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC21.25■□□□□ 0.99
COL15A1P39059 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.25■□□□□ 0.99
COL15A1P39059 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC21.25■□□□□ 0.99
COL15A1P39059 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC21.25■□□□□ 0.99
COL15A1P39059 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.25■□□□□ 0.99
COL15A1P39059 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.25■□□□□ 0.99
COL15A1P39059 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.25■□□□□ 0.99
COL15A1P39059 AC021097.1-201ENST00000607902 574 ntBASIC21.25■□□□□ 0.99
COL15A1P39059 AL662799.1-202ENST00000614205 422 ntBASIC21.25■□□□□ 0.99
COL15A1P39059 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.25■□□□□ 0.99
COL15A1P39059 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.25■□□□□ 0.99
COL15A1P39059 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC21.25■□□□□ 0.99
COL15A1P39059 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
COL15A1P39059 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL15A1P39059 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL15A1P39059 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL15A1P39059 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.25■□□□□ 0.99
COL15A1P39059 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.25■□□□□ 0.99
COL15A1P39059 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
COL15A1P39059 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
COL15A1P39059 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL15A1P39059 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21.25■□□□□ 0.99
COL15A1P39059 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.25■□□□□ 0.99
COL15A1P39059 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms