Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA11P31270 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.2■□□□□ 0.5
HOXA11P31270 AP001059.3-201ENST00000619053 235 ntBASIC18.2■□□□□ 0.5
HOXA11P31270 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXA11P31270 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA11P31270 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HOXA11P31270 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXA11P31270 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA11P31270 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA11P31270 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXA11P31270 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
HOXA11P31270 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXA11P31270 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXA11P31270 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA11P31270 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HOXA11P31270 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA11P31270 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA11P31270 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.2■□□□□ 0.5
HOXA11P31270 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
HOXA11P31270 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXA11P31270 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXA11P31270 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.19■□□□□ 0.5
HOXA11P31270 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HOXA11P31270 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 UXT-AS1-201ENST00000590504 1525 ntBASIC18.19■□□□□ 0.5
HOXA11P31270 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.19■□□□□ 0.5
HOXA11P31270 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HOXA11P31270 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HOXA11P31270 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.19■□□□□ 0.5
HOXA11P31270 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXA11P31270 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.19■□□□□ 0.5
HOXA11P31270 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.19■□□□□ 0.5
HOXA11P31270 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXA11P31270 RBPMS2P1-201ENST00000437762 623 ntBASIC18.19■□□□□ 0.5
HOXA11P31270 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
HOXA11P31270 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.19■□□□□ 0.5
HOXA11P31270 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
HOXA11P31270 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HOXA11P31270 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 SLC25A39P2-201ENST00000537614 270 ntBASIC18.19■□□□□ 0.5
HOXA11P31270 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXA11P31270 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HOXA11P31270 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.19■□□□□ 0.5
HOXA11P31270 AC093512.1-201ENST00000617969 520 ntBASIC18.19■□□□□ 0.5
HOXA11P31270 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXA11P31270 Z92544.3-201ENST00000624747 417 ntBASIC18.19■□□□□ 0.5
HOXA11P31270 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
HOXA11P31270 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HOXA11P31270 FZD10-202ENST00000539839 3282 ntBASIC18.19■□□□□ 0.5
HOXA11P31270 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.19■□□□□ 0.5
HOXA11P31270 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXA11P31270 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXA11P31270 AL645728.1-201ENST00000366221 2101 ntBASIC18.19■□□□□ 0.5
HOXA11P31270 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA11P31270 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA11P31270 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HOXA11P31270 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA11P31270 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA11P31270 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA11P31270 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXA11P31270 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
HOXA11P31270 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA11P31270 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.18■□□□□ 0.5
HOXA11P31270 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.18■□□□□ 0.5
HOXA11P31270 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXA11P31270 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXA11P31270 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXA11P31270 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXA11P31270 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.18■□□□□ 0.5
HOXA11P31270 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.18■□□□□ 0.5
HOXA11P31270 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HOXA11P31270 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA11P31270 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.18■□□□□ 0.5
HOXA11P31270 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA11P31270 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA11P31270 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.18■□□□□ 0.5
HOXA11P31270 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXA11P31270 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.18■□□□□ 0.5
HOXA11P31270 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.18■□□□□ 0.5
HOXA11P31270 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA11P31270 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXA11P31270 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.18■□□□□ 0.5
HOXA11P31270 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXA11P31270 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HOXA11P31270 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms