Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.31□□□□□ -0.12
COL8A2P25067 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
COL8A2P25067 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.31□□□□□ -0.12
COL8A2P25067 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 AC092919.2-201ENST00000623631 1645 ntBASIC14.3□□□□□ -0.12
COL8A2P25067 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.3□□□□□ -0.12
COL8A2P25067 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.3□□□□□ -0.12
COL8A2P25067 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.3□□□□□ -0.12
COL8A2P25067 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.3□□□□□ -0.12
COL8A2P25067 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
COL8A2P25067 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.3□□□□□ -0.12
COL8A2P25067 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.3□□□□□ -0.12
COL8A2P25067 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.3□□□□□ -0.12
COL8A2P25067 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.3□□□□□ -0.12
COL8A2P25067 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.3□□□□□ -0.12
COL8A2P25067 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.3□□□□□ -0.12
COL8A2P25067 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.3□□□□□ -0.12
COL8A2P25067 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.3□□□□□ -0.12
COL8A2P25067 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
COL8A2P25067 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.3□□□□□ -0.12
COL8A2P25067 SNHG9-202ENST00000564014 471 ntBASIC14.3□□□□□ -0.12
COL8A2P25067 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.3□□□□□ -0.12
COL8A2P25067 AP002472.1-201ENST00000577490 586 ntBASIC14.3□□□□□ -0.12
COL8A2P25067 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.3□□□□□ -0.12
COL8A2P25067 AC068137.2-201ENST00000605408 478 ntBASIC14.3□□□□□ -0.12
COL8A2P25067 AC091812.2-201ENST00000619081 385 ntBASIC14.3□□□□□ -0.12
COL8A2P25067 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.3□□□□□ -0.12
COL8A2P25067 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.3□□□□□ -0.12
COL8A2P25067 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COL8A2P25067 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
COL8A2P25067 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 AC116353.5-201ENST00000638148 1699 ntBASIC14.3□□□□□ -0.12
COL8A2P25067 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL8A2P25067 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COL8A2P25067 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.29□□□□□ -0.12
COL8A2P25067 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
COL8A2P25067 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
COL8A2P25067 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
COL8A2P25067 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
COL8A2P25067 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
COL8A2P25067 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
COL8A2P25067 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.29□□□□□ -0.12
COL8A2P25067 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
COL8A2P25067 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.29□□□□□ -0.12
COL8A2P25067 AP006288.1-201ENST00000446065 395 ntBASIC14.29□□□□□ -0.12
COL8A2P25067 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.29□□□□□ -0.12
COL8A2P25067 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.29□□□□□ -0.12
COL8A2P25067 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.29□□□□□ -0.12
COL8A2P25067 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.29□□□□□ -0.12
COL8A2P25067 AC092902.6-201ENST00000641783 218 ntBASIC14.29□□□□□ -0.12
COL8A2P25067 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COL8A2P25067 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.29□□□□□ -0.12
COL8A2P25067 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
COL8A2P25067 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.29□□□□□ -0.12
COL8A2P25067 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.29□□□□□ -0.12
COL8A2P25067 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
COL8A2P25067 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms