Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
CAPN3P20807 AP002414.4-201ENST00000589764 1148 ntBASIC16.36■□□□□ 0.21
CAPN3P20807 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN3P20807 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN3P20807 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CAPN3P20807 AC139530.3-201ENST00000620344 690 ntBASIC16.36■□□□□ 0.21
CAPN3P20807 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN3P20807 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
CAPN3P20807 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.36■□□□□ 0.21
CAPN3P20807 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.36■□□□□ 0.21
CAPN3P20807 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN3P20807 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN3P20807 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN3P20807 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN3P20807 KRT18P1-202ENST00000452408 1331 ntBASIC16.36■□□□□ 0.21
CAPN3P20807 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN3P20807 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN3P20807 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN3P20807 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN3P20807 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN3P20807 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN3P20807 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.36■□□□□ 0.21
CAPN3P20807 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN3P20807 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
CAPN3P20807 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN3P20807 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.36■□□□□ 0.21
CAPN3P20807 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN3P20807 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CAPN3P20807 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CAPN3P20807 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN3P20807 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN3P20807 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CAPN3P20807 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 AC022188.1-201ENST00000620960 1664 ntBASIC16.35■□□□□ 0.21
CAPN3P20807 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CAPN3P20807 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.35■□□□□ 0.21
CAPN3P20807 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CAPN3P20807 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 CHCHD2P8-201ENST00000429873 447 ntBASIC16.35■□□□□ 0.21
CAPN3P20807 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CAPN3P20807 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN3P20807 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN3P20807 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.35■□□□□ 0.21
CAPN3P20807 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CAPN3P20807 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.35■□□□□ 0.21
CAPN3P20807 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN3P20807 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.35■□□□□ 0.21
CAPN3P20807 AC124864.1-201ENST00000623408 392 ntBASIC16.35■□□□□ 0.21
CAPN3P20807 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CAPN3P20807 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN3P20807 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN3P20807 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN3P20807 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CAPN3P20807 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CAPN3P20807 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.35■□□□□ 0.21
CAPN3P20807 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.35■□□□□ 0.21
CAPN3P20807 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CAPN3P20807 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CAPN3P20807 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN3P20807 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN3P20807 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CAPN3P20807 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CAPN3P20807 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN3P20807 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPN3P20807 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CAPN3P20807 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN3P20807 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.34■□□□□ 0.21
CAPN3P20807 AP002383.4-201ENST00000442518 975 ntBASIC16.34■□□□□ 0.21
CAPN3P20807 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.34■□□□□ 0.21
CAPN3P20807 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN3P20807 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN3P20807 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.34■□□□□ 0.21
CAPN3P20807 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.34■□□□□ 0.21
CAPN3P20807 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN3P20807 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CAPN3P20807 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CAPN3P20807 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
CAPN3P20807 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms