Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3BP20337 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.91□□□□□ -0.02
RAB3BP20337 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RAB3BP20337 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.91□□□□□ -0.02
RAB3BP20337 GCSHP5-201ENST00000443090 522 ntBASIC14.91□□□□□ -0.02
RAB3BP20337 AC098590.1-201ENST00000468126 897 ntBASIC14.91□□□□□ -0.02
RAB3BP20337 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.91□□□□□ -0.02
RAB3BP20337 AP003733.1-201ENST00000491725 852 ntBASIC14.91□□□□□ -0.02
RAB3BP20337 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.91□□□□□ -0.02
RAB3BP20337 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB3BP20337 NAPSB-206ENST00000562112 1266 ntBASIC14.91□□□□□ -0.02
RAB3BP20337 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB3BP20337 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB3BP20337 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.91□□□□□ -0.02
RAB3BP20337 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3BP20337 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.91□□□□□ -0.02
RAB3BP20337 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RAB3BP20337 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB3BP20337 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3BP20337 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
RAB3BP20337 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3BP20337 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3BP20337 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3BP20337 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB3BP20337 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.9□□□□□ -0.02
RAB3BP20337 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAB3BP20337 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB3BP20337 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB3BP20337 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB3BP20337 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB3BP20337 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAB3BP20337 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB3BP20337 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
RAB3BP20337 AC007967.3-201ENST00000434308 558 ntBASIC14.9□□□□□ -0.02
RAB3BP20337 HLA-F-220ENST00000434407 884 ntBASIC14.9□□□□□ -0.02
RAB3BP20337 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RAB3BP20337 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB3BP20337 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.9□□□□□ -0.02
RAB3BP20337 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 AC010947.1-201ENST00000623454 693 ntBASIC14.9□□□□□ -0.02
RAB3BP20337 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB3BP20337 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 FLJ16779-201ENST00000612722 7638 ntBASIC14.9□□□□□ -0.02
RAB3BP20337 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB3BP20337 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAB3BP20337 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB3BP20337 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3BP20337 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RAB3BP20337 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB3BP20337 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RAB3BP20337 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB3BP20337 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RAB3BP20337 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB3BP20337 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3BP20337 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3BP20337 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB3BP20337 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB3BP20337 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB3BP20337 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3BP20337 AL135999.2-201ENST00000622438 1686 ntBASIC14.89□□□□□ -0.03
RAB3BP20337 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB3BP20337 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RAB3BP20337 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3BP20337 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3BP20337 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms