Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.6■□□□□ 0.73
ERCC3P19447 AL645728.2-201ENST00000641974 660 ntBASIC19.6■□□□□ 0.73
ERCC3P19447 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ERCC3P19447 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.6■□□□□ 0.73
ERCC3P19447 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ERCC3P19447 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC3P19447 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ERCC3P19447 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC3P19447 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC3P19447 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC3P19447 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ERCC3P19447 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.59■□□□□ 0.73
ERCC3P19447 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
ERCC3P19447 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC3P19447 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC3P19447 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC3P19447 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.59■□□□□ 0.73
ERCC3P19447 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC3P19447 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.59■□□□□ 0.73
ERCC3P19447 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.59■□□□□ 0.73
ERCC3P19447 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC3P19447 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.59■□□□□ 0.73
ERCC3P19447 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC3P19447 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC3P19447 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC3P19447 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC3P19447 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC3P19447 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ERCC3P19447 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ERCC3P19447 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
ERCC3P19447 LINC00304-203ENST00000565008 1864 ntBASIC19.58■□□□□ 0.73
ERCC3P19447 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ERCC3P19447 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.58■□□□□ 0.73
ERCC3P19447 AC141586.5-201ENST00000624546 2050 ntBASIC19.58■□□□□ 0.73
ERCC3P19447 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.58■□□□□ 0.73
ERCC3P19447 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
ERCC3P19447 OR6D1P-202ENST00000641007 5290 ntBASIC19.58■□□□□ 0.73
ERCC3P19447 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ERCC3P19447 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.58■□□□□ 0.73
ERCC3P19447 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ERCC3P19447 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC3P19447 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC3P19447 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC3P19447 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.58■□□□□ 0.72
ERCC3P19447 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ERCC3P19447 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
ERCC3P19447 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC3P19447 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ERCC3P19447 AL096865.1-201ENST00000606796 927 ntBASIC19.58■□□□□ 0.72
ERCC3P19447 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC3P19447 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.58■□□□□ 0.72
ERCC3P19447 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.58■□□□□ 0.72
ERCC3P19447 AC009093.7-201ENST00000623853 1223 ntBASIC19.58■□□□□ 0.72
ERCC3P19447 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC3P19447 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC3P19447 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ERCC3P19447 LYSMD4-203ENST00000378904 2122 ntBASIC19.58■□□□□ 0.72
ERCC3P19447 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.58■□□□□ 0.72
ERCC3P19447 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC3P19447 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC3P19447 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ERCC3P19447 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC3P19447 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC3P19447 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.57■□□□□ 0.72
ERCC3P19447 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ERCC3P19447 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.57■□□□□ 0.72
ERCC3P19447 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC3P19447 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.57■□□□□ 0.72
ERCC3P19447 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
ERCC3P19447 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ERCC3P19447 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC3P19447 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC3P19447 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC3P19447 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.57■□□□□ 0.72
ERCC3P19447 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC3P19447 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ERCC3P19447 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ERCC3P19447 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ERCC3P19447 SPDYE11-202ENST00000450699 704 ntBASIC19.57■□□□□ 0.72
ERCC3P19447 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.57■□□□□ 0.72
ERCC3P19447 FAM86C2P-203ENST00000528684 1004 ntBASIC19.57■□□□□ 0.72
ERCC3P19447 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.57■□□□□ 0.72
ERCC3P19447 SPDYE9P-201ENST00000570642 692 ntBASIC19.57■□□□□ 0.72
ERCC3P19447 AC005498.2-205ENST00000593218 784 ntBASIC19.57■□□□□ 0.72
ERCC3P19447 SPDYE10P-202ENST00000612005 668 ntBASIC19.57■□□□□ 0.72
ERCC3P19447 SPDYE8P-202ENST00000612377 668 ntBASIC19.57■□□□□ 0.72
ERCC3P19447 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.57■□□□□ 0.72
ERCC3P19447 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.57■□□□□ 0.72
ERCC3P19447 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.57■□□□□ 0.72
ERCC3P19447 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC3P19447 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC3P19447 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC3P19447 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms