Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PPP3CBP16298 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP3CBP16298 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PPP3CBP16298 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP3CBP16298 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP3CBP16298 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.28■□□□□ 0.04
PPP3CBP16298 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PPP3CBP16298 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.28■□□□□ 0.04
PPP3CBP16298 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
PPP3CBP16298 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.28■□□□□ 0.04
PPP3CBP16298 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
PPP3CBP16298 KRT18P55-202ENST00000578578 1546 ntBASIC15.27■□□□□ 0.04
PPP3CBP16298 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PPP3CBP16298 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PPP3CBP16298 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PPP3CBP16298 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.27■□□□□ 0.04
PPP3CBP16298 AP002414.3-201ENST00000589352 1468 ntBASIC15.27■□□□□ 0.04
PPP3CBP16298 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PPP3CBP16298 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PPP3CBP16298 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PPP3CBP16298 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.27■□□□□ 0.04
PPP3CBP16298 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PPP3CBP16298 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PPP3CBP16298 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PPP3CBP16298 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PPP3CBP16298 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PPP3CBP16298 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.27■□□□□ 0.04
PPP3CBP16298 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.27■□□□□ 0.04
PPP3CBP16298 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PPP3CBP16298 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.27■□□□□ 0.04
PPP3CBP16298 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PPP3CBP16298 MIR940-201ENST00000401276 94 ntBASIC15.27■□□□□ 0.04
PPP3CBP16298 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.27■□□□□ 0.04
PPP3CBP16298 BX842568.4-201ENST00000421222 227 ntBASIC15.27■□□□□ 0.04
PPP3CBP16298 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.27■□□□□ 0.04
PPP3CBP16298 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.27■□□□□ 0.04
PPP3CBP16298 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PPP3CBP16298 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PPP3CBP16298 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PPP3CBP16298 RNA5SP416-201ENST00000516838 111 ntBASIC15.27■□□□□ 0.04
PPP3CBP16298 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
PPP3CBP16298 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.27■□□□□ 0.04
PPP3CBP16298 AC004706.3-202ENST00000621574 984 ntBASIC15.27■□□□□ 0.04
PPP3CBP16298 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PPP3CBP16298 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PPP3CBP16298 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PPP3CBP16298 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PPP3CBP16298 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
PPP3CBP16298 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PPP3CBP16298 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PPP3CBP16298 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PPP3CBP16298 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PPP3CBP16298 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PPP3CBP16298 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PPP3CBP16298 AC103702.1-201ENST00000548801 2630 ntBASIC15.27■□□□□ 0.03
PPP3CBP16298 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
PPP3CBP16298 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PPP3CBP16298 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PPP3CBP16298 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PPP3CBP16298 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.26■□□□□ 0.03
PPP3CBP16298 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.26■□□□□ 0.03
PPP3CBP16298 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 FLJ38576-201ENST00000623820 2459 ntBASIC15.26■□□□□ 0.03
PPP3CBP16298 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.26■□□□□ 0.03
PPP3CBP16298 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.26■□□□□ 0.03
PPP3CBP16298 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PPP3CBP16298 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.26■□□□□ 0.03
PPP3CBP16298 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.26■□□□□ 0.03
PPP3CBP16298 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.26■□□□□ 0.03
PPP3CBP16298 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
PPP3CBP16298 KRT18P3-201ENST00000451602 1288 ntBASIC15.26■□□□□ 0.03
PPP3CBP16298 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.26■□□□□ 0.03
PPP3CBP16298 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PPP3CBP16298 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 AC140113.2-201ENST00000604370 208 ntBASIC15.26■□□□□ 0.03
PPP3CBP16298 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.26■□□□□ 0.03
PPP3CBP16298 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.26■□□□□ 0.03
PPP3CBP16298 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.26■□□□□ 0.03
PPP3CBP16298 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 AC009949.1-201ENST00000623048 1830 ntBASIC15.26■□□□□ 0.03
PPP3CBP16298 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PPP3CBP16298 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.26■□□□□ 0.03
PPP3CBP16298 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.26■□□□□ 0.03
PPP3CBP16298 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PPP3CBP16298 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms