Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC093724.1-201ENST00000448659 1027 ntBASIC28.51■■■□□ 2.15
CFTRP13569 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC28.51■■■□□ 2.15
CFTRP13569 MIR4538-201ENST00000581377 78 ntBASIC28.51■■■□□ 2.15
CFTRP13569 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC28.51■■■□□ 2.15
CFTRP13569 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CFTRP13569 BICD1-207ENST00000551848 1962 ntBASIC28.5■■■□□ 2.15
CFTRP13569 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
CFTRP13569 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CFTRP13569 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC28.5■■■□□ 2.15
CFTRP13569 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC28.5■■■□□ 2.15
CFTRP13569 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC28.5■■■□□ 2.15
CFTRP13569 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC28.5■■■□□ 2.15
CFTRP13569 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CFTRP13569 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CFTRP13569 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC28.5■■■□□ 2.15
CFTRP13569 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC28.5■■■□□ 2.15
CFTRP13569 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC28.5■■■□□ 2.15
CFTRP13569 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC28.5■■■□□ 2.15
CFTRP13569 AL671710.1-201ENST00000610245 2349 ntBASIC28.5■■■□□ 2.15
CFTRP13569 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CFTRP13569 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
CFTRP13569 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC28.49■■■□□ 2.15
CFTRP13569 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
CFTRP13569 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CFTRP13569 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CFTRP13569 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC28.49■■■□□ 2.15
CFTRP13569 NSL1-201ENST00000366976 722 ntTSL 2 BASIC28.49■■■□□ 2.15
CFTRP13569 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CFTRP13569 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC28.49■■■□□ 2.15
CFTRP13569 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC28.49■■■□□ 2.15
CFTRP13569 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC28.49■■■□□ 2.15
CFTRP13569 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC28.49■■■□□ 2.15
CFTRP13569 MIR6787-201ENST00000616675 61 ntBASIC28.49■■■□□ 2.15
CFTRP13569 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC28.49■■■□□ 2.15
CFTRP13569 PC-204ENST00000524491 1714 ntTSL 2 BASIC28.49■■■□□ 2.15
CFTRP13569 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC28.49■■■□□ 2.15
CFTRP13569 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
CFTRP13569 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC28.48■■■□□ 2.15
CFTRP13569 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CFTRP13569 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CFTRP13569 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CFTRP13569 MIR1908-201ENST00000410394 80 ntBASIC28.48■■■□□ 2.15
CFTRP13569 VMO1-203ENST00000416307 712 ntTSL 2 BASIC28.48■■■□□ 2.15
CFTRP13569 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC28.48■■■□□ 2.15
CFTRP13569 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
CFTRP13569 FAM8A2P-201ENST00000528813 1142 ntBASIC28.48■■■□□ 2.15
CFTRP13569 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CFTRP13569 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC28.48■■■□□ 2.15
CFTRP13569 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC28.48■■■□□ 2.15
CFTRP13569 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CFTRP13569 TPR-209ENST00000613151 2478 ntTSL 5 BASIC28.48■■■□□ 2.15
CFTRP13569 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
CFTRP13569 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
CFTRP13569 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
CFTRP13569 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CFTRP13569 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CFTRP13569 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
CFTRP13569 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CFTRP13569 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CFTRP13569 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC28.48■■■□□ 2.15
CFTRP13569 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
CFTRP13569 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CFTRP13569 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC28.47■■■□□ 2.15
CFTRP13569 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC28.47■■■□□ 2.15
CFTRP13569 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CFTRP13569 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CFTRP13569 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CFTRP13569 SLC25A24-204ENST00000569674 2357 ntBASIC28.47■■■□□ 2.15
CFTRP13569 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CFTRP13569 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC28.47■■■□□ 2.15
CFTRP13569 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CFTRP13569 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CFTRP13569 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC28.46■■■□□ 2.15
CFTRP13569 RAD18-204ENST00000418463 563 ntTSL 4 BASIC28.46■■■□□ 2.15
CFTRP13569 RAD18-205ENST00000421052 582 ntTSL 3 BASIC28.46■■■□□ 2.15
CFTRP13569 ACTBP11-201ENST00000436287 1126 ntBASIC28.46■■■□□ 2.15
CFTRP13569 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CFTRP13569 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC28.46■■■□□ 2.15
CFTRP13569 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC28.46■■■□□ 2.15
CFTRP13569 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CFTRP13569 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC28.46■■■□□ 2.15
CFTRP13569 RPS15-212ENST00000593052 629 ntTSL 2 BASIC28.46■■■□□ 2.15
CFTRP13569 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CFTRP13569 TECR-220ENST00000600083 1204 ntTSL 2 BASIC28.46■■■□□ 2.15
CFTRP13569 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
CFTRP13569 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CFTRP13569 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CFTRP13569 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
CFTRP13569 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
CFTRP13569 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CFTRP13569 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
CFTRP13569 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
CFTRP13569 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
CFTRP13569 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
CFTRP13569 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CFTRP13569 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CFTRP13569 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
CFTRP13569 FADS2-205ENST00000517839 469 ntTSL 3 BASIC28.46■■■□□ 2.15
CFTRP13569 AC104989.1-201ENST00000519711 778 ntBASIC28.46■■■□□ 2.15
CFTRP13569 USB1-203ENST00000539737 1212 ntTSL 2 BASIC28.46■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms