Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.55■□□□□ 0.56
CLTAP09496 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLTAP09496 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.55■□□□□ 0.56
CLTAP09496 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.54■□□□□ 0.56
CLTAP09496 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.54■□□□□ 0.56
CLTAP09496 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLTAP09496 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLTAP09496 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.54■□□□□ 0.56
CLTAP09496 AC129492.6-201ENST00000611383 1305 ntBASIC18.54■□□□□ 0.56
CLTAP09496 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.54■□□□□ 0.56
CLTAP09496 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.54■□□□□ 0.56
CLTAP09496 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLTAP09496 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLTAP09496 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.54■□□□□ 0.56
CLTAP09496 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CLTAP09496 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CLTAP09496 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.54■□□□□ 0.56
CLTAP09496 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.54■□□□□ 0.56
CLTAP09496 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.54■□□□□ 0.56
CLTAP09496 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.54■□□□□ 0.56
CLTAP09496 AD000864.1-201ENST00000624076 2295 ntBASIC18.54■□□□□ 0.56
CLTAP09496 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.54■□□□□ 0.56
CLTAP09496 AC046158.3-201ENST00000624947 2558 ntBASIC18.54■□□□□ 0.56
CLTAP09496 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 LINC02012-201ENST00000608206 1725 ntBASIC18.54■□□□□ 0.56
CLTAP09496 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.54■□□□□ 0.56
CLTAP09496 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CLTAP09496 AC002310.6-201ENST00000624451 1377 ntBASIC18.54■□□□□ 0.56
CLTAP09496 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLTAP09496 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.53■□□□□ 0.56
CLTAP09496 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLTAP09496 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLTAP09496 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.53■□□□□ 0.56
CLTAP09496 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CLTAP09496 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLTAP09496 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLTAP09496 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CLTAP09496 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CLTAP09496 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLTAP09496 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLTAP09496 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLTAP09496 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLTAP09496 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLTAP09496 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLTAP09496 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.53■□□□□ 0.56
CLTAP09496 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.53■□□□□ 0.56
CLTAP09496 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.53■□□□□ 0.56
CLTAP09496 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.53■□□□□ 0.56
CLTAP09496 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.53■□□□□ 0.56
CLTAP09496 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.53■□□□□ 0.56
CLTAP09496 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.53■□□□□ 0.56
CLTAP09496 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.53■□□□□ 0.56
CLTAP09496 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLTAP09496 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLTAP09496 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLTAP09496 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLTAP09496 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CLTAP09496 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLTAP09496 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLTAP09496 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLTAP09496 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
CLTAP09496 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CLTAP09496 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLTAP09496 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CLTAP09496 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.52■□□□□ 0.56
CLTAP09496 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLTAP09496 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLTAP09496 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.52■□□□□ 0.56
CLTAP09496 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLTAP09496 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CLTAP09496 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.52■□□□□ 0.56
CLTAP09496 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.52■□□□□ 0.56
CLTAP09496 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.52■□□□□ 0.56
CLTAP09496 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.52■□□□□ 0.56
CLTAP09496 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.52■□□□□ 0.56
CLTAP09496 FAM185BP-201ENST00000443595 716 ntBASIC18.52■□□□□ 0.56
CLTAP09496 AC096734.2-201ENST00000562054 433 ntBASIC18.52■□□□□ 0.56
CLTAP09496 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLTAP09496 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.52■□□□□ 0.56
CLTAP09496 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
CLTAP09496 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms