Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB2P05538 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 SLC22A20-204ENST00000530038 1673 ntBASIC17.17■□□□□ 0.34
HLA-DQB2P05538 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 PMS2P1-201ENST00000431037 1228 ntBASIC17.17■□□□□ 0.34
HLA-DQB2P05538 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 Z83851.2-201ENST00000609564 659 ntBASIC17.17■□□□□ 0.34
HLA-DQB2P05538 AC084018.2-201ENST00000613093 2607 ntBASIC17.17■□□□□ 0.34
HLA-DQB2P05538 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 AC006277.1-201ENST00000624348 1610 ntBASIC17.17■□□□□ 0.34
HLA-DQB2P05538 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 IL9RP2-201ENST00000423948 1312 ntBASIC17.17■□□□□ 0.34
HLA-DQB2P05538 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQB2P05538 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 AC129492.6-201ENST00000611383 1305 ntBASIC17.16■□□□□ 0.34
HLA-DQB2P05538 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQB2P05538 UBALD1-205ENST00000590891 2641 ntBASIC17.16■□□□□ 0.34
HLA-DQB2P05538 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 AC104109.2-201ENST00000602919 1418 ntBASIC17.15■□□□□ 0.34
HLA-DQB2P05538 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 PRSS29P-201ENST00000440800 595 ntBASIC17.15■□□□□ 0.34
HLA-DQB2P05538 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 AC091167.2-201ENST00000579581 588 ntBASIC17.15■□□□□ 0.34
HLA-DQB2P05538 MIR4492-201ENST00000581627 80 ntBASIC17.15■□□□□ 0.34
HLA-DQB2P05538 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HLA-DQB2P05538 AC013467.2-201ENST00000605472 835 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms