Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19■□□□□ 0.63
HMGCRP04035 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
HMGCRP04035 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19■□□□□ 0.63
HMGCRP04035 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19■□□□□ 0.63
HMGCRP04035 AC009477.1-201ENST00000452936 217 ntBASIC19■□□□□ 0.63
HMGCRP04035 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19■□□□□ 0.63
HMGCRP04035 AC105233.2-201ENST00000523697 349 ntBASIC19■□□□□ 0.63
HMGCRP04035 AF228730.5-201ENST00000530288 346 ntBASIC19■□□□□ 0.63
HMGCRP04035 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19■□□□□ 0.63
HMGCRP04035 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19■□□□□ 0.63
HMGCRP04035 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19■□□□□ 0.63
HMGCRP04035 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
HMGCRP04035 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 SLC22A20-204ENST00000530038 1673 ntBASIC19■□□□□ 0.63
HMGCRP04035 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19■□□□□ 0.63
HMGCRP04035 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 AL133373.2-201ENST00000623187 2828 ntBASIC19■□□□□ 0.63
HMGCRP04035 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19■□□□□ 0.63
HMGCRP04035 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
HMGCRP04035 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19■□□□□ 0.63
HMGCRP04035 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HMGCRP04035 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19■□□□□ 0.63
HMGCRP04035 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HMGCRP04035 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HMGCRP04035 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HMGCRP04035 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.99■□□□□ 0.63
HMGCRP04035 AP3S2-216ENST00000617003 1561 ntBASIC18.99■□□□□ 0.63
HMGCRP04035 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.99■□□□□ 0.63
HMGCRP04035 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
HMGCRP04035 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCRP04035 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCRP04035 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.99■□□□□ 0.63
HMGCRP04035 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.99■□□□□ 0.63
HMGCRP04035 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.99■□□□□ 0.63
HMGCRP04035 AL132655.2-201ENST00000596276 594 ntBASIC18.99■□□□□ 0.63
HMGCRP04035 AP001350.2-201ENST00000625104 1094 ntBASIC18.99■□□□□ 0.63
HMGCRP04035 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HMGCRP04035 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.99■□□□□ 0.63
HMGCRP04035 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGCRP04035 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.99■□□□□ 0.63
HMGCRP04035 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGCRP04035 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCRP04035 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCRP04035 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCRP04035 AC138969.3-201ENST00000546612 1459 ntBASIC18.98■□□□□ 0.63
HMGCRP04035 AC138932.2-201ENST00000548268 1459 ntBASIC18.98■□□□□ 0.63
HMGCRP04035 AC126755.4-201ENST00000549796 1459 ntBASIC18.98■□□□□ 0.63
HMGCRP04035 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCRP04035 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCRP04035 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCRP04035 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCRP04035 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
HMGCRP04035 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCRP04035 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.98■□□□□ 0.63
HMGCRP04035 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGCRP04035 AC140912.1-201ENST00000577171 1054 ntBASIC18.98■□□□□ 0.63
HMGCRP04035 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.98■□□□□ 0.63
HMGCRP04035 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.98■□□□□ 0.63
HMGCRP04035 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.98■□□□□ 0.63
HMGCRP04035 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCRP04035 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGCRP04035 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.98■□□□□ 0.63
HMGCRP04035 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGCRP04035 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
HMGCRP04035 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGCRP04035 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGCRP04035 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HMGCRP04035 TOP3BP1-201ENST00000420768 1380 ntBASIC18.97■□□□□ 0.63
HMGCRP04035 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms