Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.95■□□□□ 0.14
LDB3O75112 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.95■□□□□ 0.14
LDB3O75112 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 AC010654.1-201ENST00000615722 808 ntBASIC15.95■□□□□ 0.14
LDB3O75112 AC009053.2-201ENST00000563701 2365 ntBASIC15.95■□□□□ 0.14
LDB3O75112 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.95■□□□□ 0.14
LDB3O75112 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LDB3O75112 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.95■□□□□ 0.14
LDB3O75112 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.95■□□□□ 0.14
LDB3O75112 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
LDB3O75112 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LDB3O75112 AL121761.2-201ENST00000598007 1648 ntBASIC15.94■□□□□ 0.14
LDB3O75112 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LDB3O75112 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LDB3O75112 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.94■□□□□ 0.14
LDB3O75112 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LDB3O75112 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LDB3O75112 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.94■□□□□ 0.14
LDB3O75112 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
LDB3O75112 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
LDB3O75112 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LDB3O75112 AL022342.1-201ENST00000400363 863 ntBASIC15.94■□□□□ 0.14
LDB3O75112 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.94■□□□□ 0.14
LDB3O75112 AC007967.2-201ENST00000432613 625 ntBASIC15.94■□□□□ 0.14
LDB3O75112 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.94■□□□□ 0.14
LDB3O75112 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.94■□□□□ 0.14
LDB3O75112 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LDB3O75112 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LDB3O75112 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.94■□□□□ 0.14
LDB3O75112 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.94■□□□□ 0.14
LDB3O75112 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LDB3O75112 ZNF259P1-201ENST00000407656 1365 ntBASIC15.94■□□□□ 0.14
LDB3O75112 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.94■□□□□ 0.14
LDB3O75112 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LDB3O75112 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LDB3O75112 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LDB3O75112 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.94■□□□□ 0.14
LDB3O75112 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LDB3O75112 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.94■□□□□ 0.14
LDB3O75112 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LDB3O75112 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LDB3O75112 RNF216P1-203ENST00000404404 2427 ntBASIC15.94■□□□□ 0.14
LDB3O75112 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LDB3O75112 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.94■□□□□ 0.14
LDB3O75112 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LDB3O75112 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LDB3O75112 TUBB8P12-201ENST00000308911 1335 ntBASIC15.94■□□□□ 0.14
LDB3O75112 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.94■□□□□ 0.14
LDB3O75112 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LDB3O75112 TUBB7P-202ENST00000428444 1305 ntBASIC15.94■□□□□ 0.14
LDB3O75112 TUBB8P7-204ENST00000567960 1332 ntBASIC15.94■□□□□ 0.14
LDB3O75112 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
LDB3O75112 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.93■□□□□ 0.14
LDB3O75112 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
LDB3O75112 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
LDB3O75112 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.93■□□□□ 0.14
LDB3O75112 PRSS29P-201ENST00000440800 595 ntBASIC15.93■□□□□ 0.14
LDB3O75112 VN2R19P-201ENST00000442399 1052 ntBASIC15.93■□□□□ 0.14
LDB3O75112 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.93■□□□□ 0.14
LDB3O75112 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.93■□□□□ 0.14
LDB3O75112 AC107918.2-201ENST00000530817 355 ntBASIC15.93■□□□□ 0.14
LDB3O75112 AC106730.1-201ENST00000566722 1090 ntBASIC15.93■□□□□ 0.14
LDB3O75112 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 REXO1L3P-201ENST00000622202 1288 ntBASIC15.93■□□□□ 0.14
LDB3O75112 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.93■□□□□ 0.14
LDB3O75112 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.93■□□□□ 0.14
LDB3O75112 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.93■□□□□ 0.14
LDB3O75112 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LDB3O75112 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 KRT8P49-201ENST00000604166 1432 ntBASIC15.93■□□□□ 0.14
LDB3O75112 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LDB3O75112 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LDB3O75112 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LDB3O75112 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LDB3O75112 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LDB3O75112 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LDB3O75112 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LDB3O75112 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LDB3O75112 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LDB3O75112 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms