Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
OPHN1O60890 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPHN1O60890 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPHN1O60890 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.75■□□□□ 0.43
OPHN1O60890 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
OPHN1O60890 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.75■□□□□ 0.43
OPHN1O60890 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
OPHN1O60890 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
OPHN1O60890 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
OPHN1O60890 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
OPHN1O60890 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
OPHN1O60890 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
OPHN1O60890 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
OPHN1O60890 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.74■□□□□ 0.43
OPHN1O60890 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.74■□□□□ 0.43
OPHN1O60890 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.74■□□□□ 0.43
OPHN1O60890 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.74■□□□□ 0.43
OPHN1O60890 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.74■□□□□ 0.43
OPHN1O60890 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.74■□□□□ 0.43
OPHN1O60890 KLF4P1-201ENST00000412782 1185 ntBASIC17.74■□□□□ 0.43
OPHN1O60890 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.74■□□□□ 0.43
OPHN1O60890 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.74■□□□□ 0.43
OPHN1O60890 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.74■□□□□ 0.43
OPHN1O60890 SART3-203ENST00000546611 1184 ntBASIC17.74■□□□□ 0.43
OPHN1O60890 AC040169.1-201ENST00000565382 521 ntBASIC17.74■□□□□ 0.43
OPHN1O60890 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.74■□□□□ 0.43
OPHN1O60890 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.74■□□□□ 0.43
OPHN1O60890 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
OPHN1O60890 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
OPHN1O60890 AC132938.5-201ENST00000624980 1813 ntBASIC17.74■□□□□ 0.43
OPHN1O60890 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.74■□□□□ 0.43
OPHN1O60890 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
OPHN1O60890 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
OPHN1O60890 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
OPHN1O60890 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
OPHN1O60890 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
OPHN1O60890 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.73■□□□□ 0.43
OPHN1O60890 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 AC060834.1-201ENST00000443027 2032 ntBASIC17.73■□□□□ 0.43
OPHN1O60890 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.73■□□□□ 0.43
OPHN1O60890 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.73■□□□□ 0.43
OPHN1O60890 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.73■□□□□ 0.43
OPHN1O60890 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
OPHN1O60890 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.73■□□□□ 0.43
OPHN1O60890 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.73■□□□□ 0.43
OPHN1O60890 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.73■□□□□ 0.43
OPHN1O60890 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
OPHN1O60890 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
OPHN1O60890 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.73■□□□□ 0.43
OPHN1O60890 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.73■□□□□ 0.43
OPHN1O60890 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.73■□□□□ 0.43
OPHN1O60890 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
OPHN1O60890 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.73■□□□□ 0.43
OPHN1O60890 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
OPHN1O60890 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
OPHN1O60890 AL356309.3-201ENST00000624132 1934 ntBASIC17.72■□□□□ 0.43
OPHN1O60890 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
OPHN1O60890 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
OPHN1O60890 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.72■□□□□ 0.43
OPHN1O60890 AL135999.2-201ENST00000622438 1686 ntBASIC17.72■□□□□ 0.43
OPHN1O60890 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.72■□□□□ 0.43
OPHN1O60890 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.72■□□□□ 0.43
OPHN1O60890 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
OPHN1O60890 YBX2P1-201ENST00000394192 760 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms