Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.14■□□□□ 0.01
CYTIPO60759 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CYTIPO60759 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CYTIPO60759 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.13■□□□□ 0.01
CYTIPO60759 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.13■□□□□ 0.01
CYTIPO60759 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CYTIPO60759 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 IGLL3P-201ENST00000412472 434 ntBASIC15.13■□□□□ 0.01
CYTIPO60759 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.13■□□□□ 0.01
CYTIPO60759 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.13■□□□□ 0.01
CYTIPO60759 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.13■□□□□ 0.01
CYTIPO60759 FAM185BP-201ENST00000443595 716 ntBASIC15.13■□□□□ 0.01
CYTIPO60759 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.13■□□□□ 0.01
CYTIPO60759 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.13■□□□□ 0.01
CYTIPO60759 CXCL1P1-201ENST00000502804 216 ntBASIC15.13■□□□□ 0.01
CYTIPO60759 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.13■□□□□ 0.01
CYTIPO60759 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.13■□□□□ 0.01
CYTIPO60759 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.13■□□□□ 0.01
CYTIPO60759 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.13■□□□□ 0.01
CYTIPO60759 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 TUBB8P12-201ENST00000308911 1335 ntBASIC15.13■□□□□ 0.01
CYTIPO60759 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 TUBB7P-202ENST00000428444 1305 ntBASIC15.13■□□□□ 0.01
CYTIPO60759 TUBB8P7-204ENST00000567960 1332 ntBASIC15.13■□□□□ 0.01
CYTIPO60759 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CYTIPO60759 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CYTIPO60759 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
CYTIPO60759 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.12■□□□□ 0.01
CYTIPO60759 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CYTIPO60759 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 TOP3BP1-201ENST00000420768 1380 ntBASIC15.12■□□□□ 0.01
CYTIPO60759 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 KRT8P49-201ENST00000604166 1432 ntBASIC15.12■□□□□ 0.01
CYTIPO60759 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.12■□□□□ 0.01
CYTIPO60759 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.12■□□□□ 0.01
CYTIPO60759 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.12■□□□□ 0.01
CYTIPO60759 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.12■□□□□ 0.01
CYTIPO60759 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.12■□□□□ 0.01
CYTIPO60759 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
CYTIPO60759 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.12■□□□□ 0.01
CYTIPO60759 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.12■□□□□ 0.01
CYTIPO60759 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 AC096734.2-201ENST00000562054 433 ntBASIC15.12■□□□□ 0.01
CYTIPO60759 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.12■□□□□ 0.01
CYTIPO60759 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.12■□□□□ 0.01
CYTIPO60759 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.12■□□□□ 0.01
CYTIPO60759 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.12■□□□□ 0.01
CYTIPO60759 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.12■□□□□ 0.01
CYTIPO60759 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
CYTIPO60759 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CYTIPO60759 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CYTIPO60759 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CYTIPO60759 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
CYTIPO60759 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CYTIPO60759 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CYTIPO60759 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CYTIPO60759 AC124067.4-201ENST00000519691 2379 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms