Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 AC129492.6-201ENST00000611383 1305 ntBASIC16.81■□□□□ 0.28
PCDHGA12O60330 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 FAM86GP-201ENST00000448322 971 ntBASIC16.81■□□□□ 0.28
PCDHGA12O60330 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGA12O60330 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGA12O60330 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA12O60330 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA12O60330 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA12O60330 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA12O60330 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA12O60330 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA12O60330 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA12O60330 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 FAM86C2P-203ENST00000528684 1004 ntBASIC16.8■□□□□ 0.28
PCDHGA12O60330 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 AC009093.7-201ENST00000623853 1223 ntBASIC16.8■□□□□ 0.28
PCDHGA12O60330 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA12O60330 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA12O60330 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA12O60330 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA12O60330 KRT18P55-202ENST00000578578 1546 ntBASIC16.8■□□□□ 0.28
PCDHGA12O60330 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGA12O60330 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGA12O60330 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.79■□□□□ 0.28
PCDHGA12O60330 AL627223.1-201ENST00000416693 442 ntBASIC16.79■□□□□ 0.28
PCDHGA12O60330 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 AC067863.1-201ENST00000494933 530 ntBASIC16.79■□□□□ 0.28
PCDHGA12O60330 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 AC005498.2-205ENST00000593218 784 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms