Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.01■□□□□ 0.63
ACTN4O43707 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.01■□□□□ 0.63
ACTN4O43707 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.01■□□□□ 0.63
ACTN4O43707 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.01■□□□□ 0.63
ACTN4O43707 AC025062.2-201ENST00000605477 670 ntBASIC19.01■□□□□ 0.63
ACTN4O43707 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.01■□□□□ 0.63
ACTN4O43707 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ACTN4O43707 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.01■□□□□ 0.63
ACTN4O43707 AC006538.1-201ENST00000567905 1585 ntBASIC19.01■□□□□ 0.63
ACTN4O43707 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.01■□□□□ 0.63
ACTN4O43707 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ACTN4O43707 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ACTN4O43707 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ACTN4O43707 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19■□□□□ 0.63
ACTN4O43707 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
ACTN4O43707 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ACTN4O43707 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19■□□□□ 0.63
ACTN4O43707 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19■□□□□ 0.63
ACTN4O43707 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19■□□□□ 0.63
ACTN4O43707 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ACTN4O43707 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19■□□□□ 0.63
ACTN4O43707 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19■□□□□ 0.63
ACTN4O43707 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ACTN4O43707 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ACTN4O43707 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ACTN4O43707 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19■□□□□ 0.63
ACTN4O43707 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ACTN4O43707 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19■□□□□ 0.63
ACTN4O43707 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ACTN4O43707 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19■□□□□ 0.63
ACTN4O43707 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19■□□□□ 0.63
ACTN4O43707 HLA-J-202ENST00000469281 1241 ntBASIC19■□□□□ 0.63
ACTN4O43707 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19■□□□□ 0.63
ACTN4O43707 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
ACTN4O43707 AC091304.2-201ENST00000564639 760 ntBASIC19■□□□□ 0.63
ACTN4O43707 AC139887.3-201ENST00000568585 713 ntBASIC19■□□□□ 0.63
ACTN4O43707 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19■□□□□ 0.63
ACTN4O43707 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19■□□□□ 0.63
ACTN4O43707 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ACTN4O43707 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ACTN4O43707 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19■□□□□ 0.63
ACTN4O43707 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19■□□□□ 0.63
ACTN4O43707 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ACTN4O43707 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
ACTN4O43707 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19■□□□□ 0.63
ACTN4O43707 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ACTN4O43707 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ACTN4O43707 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19■□□□□ 0.63
ACTN4O43707 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ACTN4O43707 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19■□□□□ 0.63
ACTN4O43707 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ACTN4O43707 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19■□□□□ 0.63
ACTN4O43707 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ACTN4O43707 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
ACTN4O43707 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 SNX33P1-201ENST00000592116 1762 ntBASIC18.99■□□□□ 0.63
ACTN4O43707 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.99■□□□□ 0.63
ACTN4O43707 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.99■□□□□ 0.63
ACTN4O43707 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.99■□□□□ 0.63
ACTN4O43707 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.99■□□□□ 0.63
ACTN4O43707 AF238378.1-201ENST00000526806 358 ntBASIC18.99■□□□□ 0.63
ACTN4O43707 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
ACTN4O43707 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ACTN4O43707 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.99■□□□□ 0.63
ACTN4O43707 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ACTN4O43707 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ACTN4O43707 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.98■□□□□ 0.63
ACTN4O43707 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACTN4O43707 AC092364.2-201ENST00000596710 2692 ntBASIC18.98■□□□□ 0.63
ACTN4O43707 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACTN4O43707 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.98■□□□□ 0.63
ACTN4O43707 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ACTN4O43707 AC079328.2-201ENST00000561241 3354 ntBASIC18.98■□□□□ 0.63
ACTN4O43707 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ACTN4O43707 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms