Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD6O43541 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SMAD6O43541 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SMAD6O43541 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.06■□□□□ 0.32
SMAD6O43541 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.06■□□□□ 0.32
SMAD6O43541 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SMAD6O43541 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.06■□□□□ 0.32
SMAD6O43541 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SMAD6O43541 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.06■□□□□ 0.32
SMAD6O43541 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.06■□□□□ 0.32
SMAD6O43541 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SMAD6O43541 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.06■□□□□ 0.32
SMAD6O43541 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SMAD6O43541 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SMAD6O43541 AC112191.1-201ENST00000523689 701 ntBASIC17.06■□□□□ 0.32
SMAD6O43541 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SMAD6O43541 AL596442.2-201ENST00000610240 980 ntBASIC17.06■□□□□ 0.32
SMAD6O43541 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.06■□□□□ 0.32
SMAD6O43541 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.06■□□□□ 0.32
SMAD6O43541 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.06■□□□□ 0.32
SMAD6O43541 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SMAD6O43541 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.06■□□□□ 0.32
SMAD6O43541 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD6O43541 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.06■□□□□ 0.32
SMAD6O43541 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SMAD6O43541 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.05■□□□□ 0.32
SMAD6O43541 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
SMAD6O43541 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.05■□□□□ 0.32
SMAD6O43541 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 AC002056.1-201ENST00000395613 760 ntBASIC17.05■□□□□ 0.32
SMAD6O43541 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.05■□□□□ 0.32
SMAD6O43541 AP006288.1-201ENST00000446065 395 ntBASIC17.05■□□□□ 0.32
SMAD6O43541 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.05■□□□□ 0.32
SMAD6O43541 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.05■□□□□ 0.32
SMAD6O43541 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SMAD6O43541 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SMAD6O43541 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.05■□□□□ 0.32
SMAD6O43541 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
SMAD6O43541 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD6O43541 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 AL671710.1-201ENST00000610245 2349 ntBASIC17.04■□□□□ 0.32
SMAD6O43541 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
SMAD6O43541 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 AL645728.1-201ENST00000366221 2101 ntBASIC17.04■□□□□ 0.32
SMAD6O43541 RNU1-129P-201ENST00000384064 167 ntBASIC17.04■□□□□ 0.32
SMAD6O43541 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.04■□□□□ 0.32
SMAD6O43541 ADH5P3-201ENST00000433842 1137 ntBASIC17.04■□□□□ 0.32
SMAD6O43541 ACTG1P14-201ENST00000446382 1122 ntBASIC17.04■□□□□ 0.32
SMAD6O43541 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD6O43541 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.04■□□□□ 0.32
SMAD6O43541 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SMAD6O43541 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.04■□□□□ 0.32
SMAD6O43541 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.04■□□□□ 0.32
SMAD6O43541 U1.21-201ENST00000580816 167 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms