Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASQ2O14958 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.16■□□□□ 0.18
CASQ2O14958 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CASQ2O14958 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASQ2O14958 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.16■□□□□ 0.18
CASQ2O14958 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.15■□□□□ 0.18
CASQ2O14958 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CASQ2O14958 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
CASQ2O14958 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.15■□□□□ 0.18
CASQ2O14958 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CASQ2O14958 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.15■□□□□ 0.18
CASQ2O14958 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CASQ2O14958 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.15■□□□□ 0.18
CASQ2O14958 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.15■□□□□ 0.18
CASQ2O14958 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.15■□□□□ 0.18
CASQ2O14958 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.15■□□□□ 0.18
CASQ2O14958 AL138781.1-201ENST00000566567 1274 ntBASIC16.15■□□□□ 0.18
CASQ2O14958 AC022517.1-201ENST00000592429 346 ntBASIC16.15■□□□□ 0.18
CASQ2O14958 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.15■□□□□ 0.18
CASQ2O14958 DGCR10-201ENST00000609839 495 ntBASIC16.15■□□□□ 0.18
CASQ2O14958 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CASQ2O14958 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CASQ2O14958 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CASQ2O14958 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.15■□□□□ 0.18
CASQ2O14958 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CASQ2O14958 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 TNRC18P2-201ENST00000417666 2714 ntBASIC16.15■□□□□ 0.18
CASQ2O14958 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.15■□□□□ 0.18
CASQ2O14958 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CASQ2O14958 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CASQ2O14958 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.14■□□□□ 0.17
CASQ2O14958 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CASQ2O14958 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CASQ2O14958 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.14■□□□□ 0.17
CASQ2O14958 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.14■□□□□ 0.17
CASQ2O14958 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.14■□□□□ 0.17
CASQ2O14958 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.14■□□□□ 0.17
CASQ2O14958 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.14■□□□□ 0.17
CASQ2O14958 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.14■□□□□ 0.17
CASQ2O14958 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.14■□□□□ 0.17
CASQ2O14958 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.14■□□□□ 0.17
CASQ2O14958 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.14■□□□□ 0.17
CASQ2O14958 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.14■□□□□ 0.17
CASQ2O14958 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.14■□□□□ 0.17
CASQ2O14958 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CASQ2O14958 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.14■□□□□ 0.17
CASQ2O14958 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 PCDHA3-202ENST00000532566 4594 ntBASIC16.14■□□□□ 0.17
CASQ2O14958 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.14■□□□□ 0.17
CASQ2O14958 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.14■□□□□ 0.17
CASQ2O14958 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CASQ2O14958 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.14■□□□□ 0.17
CASQ2O14958 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASQ2O14958 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASQ2O14958 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASQ2O14958 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASQ2O14958 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CASQ2O14958 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.13■□□□□ 0.17
CASQ2O14958 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASQ2O14958 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASQ2O14958 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASQ2O14958 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.13■□□□□ 0.17
CASQ2O14958 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CASQ2O14958 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASQ2O14958 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.13■□□□□ 0.17
CASQ2O14958 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASQ2O14958 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASQ2O14958 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.13■□□□□ 0.17
CASQ2O14958 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CASQ2O14958 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms